RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CCDC144CPQ8IYA2 1237 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 ZNF397Q8NF99 534 aaPredicted RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 ZNF75DP51815 510 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 PDRG1Q9NUG6 133 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
LINC00954-202ENST00000449086 STK3Q13188 491 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
LINC00954-202ENST00000449086 GORABQ5T7V8 394 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 STYK1Q6J9G0 422 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 SPATA32Q96LK8 384 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 COL11A2P13942 1736 aaPredicted RBP9.5□□□□□ -0.89
LINC00954-202ENST00000449086 BECN2A8MW95 431 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 CSF1RP07333 972 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 SKILP12757 684 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 CTSWP56202 376 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 OS9Q13438 667 aaPredicted RBP9.5□□□□□ -0.89
LINC00954-202ENST00000449086 CDC37L1Q7L3B6 337 aa9.5□□□□□ -0.89
LINC00954-202ENST00000449086 A0A087WWV3 80 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 NPR1P16066 1061 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 ATP8B2P98198 1209 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 ADCK5Q3MIX3 580 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 CALCOCO1Q9P1Z2 691 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 RAD50Q92878 1312 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 POLR3GO15318 223 aaPredicted RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 NBPF7P0C2Y1 421 aaPredicted RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 MTX1Q13505 466 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 MASTLQ96GX5 879 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
LINC00954-202ENST00000449086 PPP1R1BQ9UD71 204 aaPredicted RBP9.49□□□□□ -0.89
LINC00954-202ENST00000449086 H0YIN7 160 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 TNNT3P45378 269 aaPredicted RBP9.48□□□□□ -0.89
LINC00954-202ENST00000449086 FOSBP53539 338 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 FOXO4P98177 505 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 RBM17Q96I25 401 aaKnown RBP9.48□□□□□ -0.89
LINC00954-202ENST00000449086 CYP46A1Q9Y6A2 500 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 SGSM2O43147 1006 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 NR1I2O75469 434 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 SRGNP10124 158 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 ERCC6LQ2NKX8 1250 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 SUCLG2Q96I99 432 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 TTC14Q96N46 770 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 SYCP1Q15431 976 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 ME3Q16798 604 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 TTLL11Q8NHH1 800 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 ZBTB9Q96C00 473 aa9.48□□□□□ -0.89
LINC00954-202ENST00000449086 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
LINC00954-202ENST00000449086 LRRC37AA6NMS7 1700 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 C2CD5Q86YS7 1000 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 LRRC8AQ8IWT6 810 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
LINC00954-202ENST00000449086 KAZALD1Q96I82 304 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 CCDC69A6NI79 296 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 SLU7O95391 586 aaKnown RBP9.47□□□□□ -0.89
LINC00954-202ENST00000449086 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
LINC00954-202ENST00000449086 ZKSCAN1P17029 563 aaPredicted RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 DDX46Q7L014 1031 aaKnown RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 PLA2G4DQ86XP0 818 aa9.46□□□□□ -0.89
LINC00954-202ENST00000449086 SYNE4Q8N205 404 aa9.46□□□□□ -0.89
LINC00954-202ENST00000449086 ERCC4Q92889 916 aaPredicted RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 DDX11Q96FC9 970 aa9.46□□□□□ -0.89
LINC00954-202ENST00000449086 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 CDC5LQ99459 802 aaKnown RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.89
LINC00954-202ENST00000449086 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 BBOX1O75936 387 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 HNRNPH2P55795 449 aaKnown RBP9.46□□□□□ -0.9
LINC00954-202ENST00000449086 PTH1RQ03431 593 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 GRAPQ13588 217 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 GRAPLQ8TC17 118 aaPredicted RBP9.46□□□□□ -0.9
LINC00954-202ENST00000449086 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.9
LINC00954-202ENST00000449086 BICC1Q9H694 974 aaKnown RBP9.46□□□□□ -0.9
LINC00954-202ENST00000449086 ARFGEF1Q9Y6D6 1849 aa9.46□□□□□ -0.9
LINC00954-202ENST00000449086 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
LINC00954-202ENST00000449086 KCNA3P22001 575 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 SOGA3Q5TF21 947 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 HOMER1Q86YM7 354 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 NEK11Q8NG66 645 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
LINC00954-202ENST00000449086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.45□□□□□ -0.9
LINC00954-202ENST00000449086 CCDC171Q6TFL3 1326 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms