RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 GOLIM4O00461 696 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 PLSCR1O15162 318 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 SLC5A1P13866 664 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 ZKSCAN1P17029 563 aaPredicted RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 ADORA1P30542 326 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 PSEN2P49810 448 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 NEK4P51957 841 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 NFKBIBQ15653 356 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 ERFEQ4G0M1 354 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 FAM182BQ5T319 152 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 GORABQ5T7V8 394 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 TPTE2Q6XPS3 522 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 DNAJC2Q99543 621 aaKnown RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 LRRC4BQ9NT99 713 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 BSDC1Q9NW68 430 aaPredicted RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 RBM8AQ9Y5S9 174 aaKnown RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 CARMIL3Q8ND23 1372 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 TNRC6CQ9HCJ0 1690 aaKnown RBP8.29□□□□□ -1.08
RFC4-209ENST00000448497 KIAA1551Q9HCM1 1747 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 COL4A1P02462 1669 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 TK2O00142 265 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 IGSF3O75054 1194 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 PSMA5P28066 241 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 RFC4P35249 363 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 KCNQ4P56696 695 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 KRT32Q14532 448 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 CREB3L3Q68CJ9 461 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 ZSCAN25Q6NSZ9 544 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
RFC4-209ENST00000448497 ANKRD18AQ8IVF6 992 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 EDC3Q96F86 508 aaKnown RBP8.28□□□□□ -1.08
RFC4-209ENST00000448497 NLRP3Q96P20 1036 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 CCDC85AQ96PX6 553 aaPredicted RBP8.28□□□□□ -1.08
RFC4-209ENST00000448497 ZBED2Q9BTP6 218 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 SLKQ9H2G2 1235 aaPredicted RBP8.28□□□□□ -1.08
RFC4-209ENST00000448497 SEC31BQ9NQW1 1179 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 ZNF804BA4D1E1 1349 aa8.28□□□□□ -1.08
RFC4-209ENST00000448497 PDS5AQ29RF7 1337 aaKnown RBP8.28□□□□□ -1.08
RFC4-209ENST00000448497 SLC27A2O14975 620 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 HSP90AA1P07900 732 aaKnown RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 MCAMP43121 646 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 NUCB2P80303 420 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.09
RFC4-209ENST00000448497 RAB3GAP1Q15042 981 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 UBE3CQ15386 1083 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 PADI6Q6TGC4 694 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 ZNF589Q86UQ0 364 aaPredicted RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 PACS2Q86VP3 889 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 AMIGO3Q86WK7 504 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 NBPF5PQ86XG9 351 aaPredicted RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 APPBP2Q92624 585 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.27□□□□□ -1.091e-8■■□□□ 11.5
RFC4-209ENST00000448497 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
RFC4-209ENST00000448497 CHD4Q14839 1912 aa8.27□□□□□ -1.09
RFC4-209ENST00000448497 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 CCDC88AQ3V6T2 1871 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 TM4SF1P30408 202 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 ZAP70P43403 619 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 CHRNDQ07001 517 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 SCARF1Q14162 830 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 NFIXQ14938 502 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 PRPF40BQ6NWY9 871 aaKnown RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 RUFY3Q7L099 469 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 ZSCAN31Q96LW9 406 aaPredicted RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
RFC4-209ENST00000448497 LIMCH1Q9UPQ0 1083 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 MAST3O60307 1309 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 ZMYM6O95789 1325 aa8.26□□□□□ -1.09
RFC4-209ENST00000448497 MAST2Q6P0Q8 1798 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 IRF6O14896 467 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 TRIM37O94972 964 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 OATP04181 439 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
RFC4-209ENST00000448497 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
RFC4-209ENST00000448497 GYS1P13807 737 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
RFC4-209ENST00000448497 ADD2P35612 726 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 PHKA1P46020 1223 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 KCNJ4P48050 445 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
RFC4-209ENST00000448497 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 TXNRD1Q16881 649 aa8.25□□□□□ -1.09
RFC4-209ENST00000448497 CRY2Q49AN0 593 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms