RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 ANKRD13AQ8IZ07 590 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 VGLL2Q8N8G2 317 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 ELP3Q9H9T3 547 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
SMARCAL1-210ENST00000445153 TESPA1A2RU30 521 aaPredicted RBP17.87■□□□□ 0.45
SMARCAL1-210ENST00000445153 CRHR2Q13324 411 aa17.87■□□□□ 0.45
SMARCAL1-210ENST00000445153 OTOP1Q7RTM1 612 aa17.87■□□□□ 0.45
SMARCAL1-210ENST00000445153 USP44Q9H0E7 712 aa17.87■□□□□ 0.45
SMARCAL1-210ENST00000445153 TRIM17Q9Y577 477 aa17.87■□□□□ 0.45
SMARCAL1-210ENST00000445153 LAMB1P07942 1786 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 PDE8BO95263 885 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 BCAMP50895 628 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 CACNB3P54284 484 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 CHAF1AQ13111 956 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 OPTNQ96CV9 577 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 MS4A4AQ96JQ5 239 aa17.86■□□□□ 0.45
SMARCAL1-210ENST00000445153 TNFAIP1Q13829 316 aa17.85■□□□□ 0.45
SMARCAL1-210ENST00000445153 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
SMARCAL1-210ENST00000445153 CD99L2Q8TCZ2 262 aa17.85■□□□□ 0.45
SMARCAL1-210ENST00000445153 OTOFQ9HC10 1997 aa17.85■□□□□ 0.45
SMARCAL1-210ENST00000445153 FGFR2P21802 821 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 RFX5P48382 616 aaPredicted RBP17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 VGLL4Q14135 290 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 VPS37DQ86XT2 251 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 BRI3BPQ8WY22 251 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 ARAP2Q8WZ64 1704 aa17.83■□□□□ 0.44
SMARCAL1-210ENST00000445153 POTEFA5A3E0 1075 aa17.82■□□□□ 0.44
SMARCAL1-210ENST00000445153 HDLBPQ00341 1268 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-210ENST00000445153 CAVIN4Q5BKX8 364 aa17.82■□□□□ 0.44
SMARCAL1-210ENST00000445153 APOBEC3HQ6NTF7 200 aaKnown RBP17.82■□□□□ 0.44
SMARCAL1-210ENST00000445153 PTPN22Q9Y2R2 807 aa17.82■□□□□ 0.44
SMARCAL1-210ENST00000445153 PTPRCP08575 1304 aa17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 PRPF38BQ5VTL8 546 aaKnown RBP17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 OTUD7BQ6GQQ9 843 aa17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
SMARCAL1-210ENST00000445153 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 TNNI2P48788 182 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 SP3Q02447 781 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 TBC1D22AQ8WUA7 517 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 TEKT1Q969V4 418 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 OTUD5Q96G74 571 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 ZDHHC15Q96MV8 337 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 MRIQ9BWK5 157 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 HTTP42858 3142 aa17.8■□□□□ 0.44
SMARCAL1-210ENST00000445153 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 E9PSI1 815 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 CCL15Q16663 113 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 ATG9AQ7Z3C6 839 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
SMARCAL1-210ENST00000445153 EYA2O00167 538 aa17.78■□□□□ 0.44
SMARCAL1-210ENST00000445153 PUM3Q15397 648 aaKnown RBP17.78■□□□□ 0.44
SMARCAL1-210ENST00000445153 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
SMARCAL1-210ENST00000445153 GTF2A2P52657 109 aa17.77■□□□□ 0.44
SMARCAL1-210ENST00000445153 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
SMARCAL1-210ENST00000445153 CSADQ9Y600 493 aa17.77■□□□□ 0.44
SMARCAL1-210ENST00000445153 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 FAM83AQ86UY5 434 aa17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 ARMC5Q96C12 935 aa17.76■□□□□ 0.43
SMARCAL1-210ENST00000445153 IRF6O14896 467 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 FKBP1CQ5VVH2 108 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 MIGA2Q7L4E1 593 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 TRMT2AQ8IZ69 625 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 LPIN2Q92539 896 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 WRNIP1Q96S55 665 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 ZFYVE28Q9HCC9 887 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 SUGT1Q9Y2Z0 365 aa17.75■□□□□ 0.43
SMARCAL1-210ENST00000445153 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 EN2P19622 333 aaPredicted RBP17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 DIXDC1Q155Q3 683 aa17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 ERO1BQ86YB8 467 aa17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 SIL1Q9H173 461 aa17.74■□□□□ 0.43
SMARCAL1-210ENST00000445153 SLC5A1P13866 664 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 PRDX5P30044 214 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 INPP5BP32019 993 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 NFIAQ12857 509 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 CDC42EP5Q6NZY7 148 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 WDR66Q8TBY9 1149 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 ARHGAP39Q9C0H5 1083 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 SMC4Q9NTJ3 1288 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 TMOD2Q9NZR1 351 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 DAGLAQ9Y4D2 1042 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 PTCH2Q9Y6C5 1203 aa17.73■□□□□ 0.43
SMARCAL1-210ENST00000445153 CETPP11597 493 aa17.72■□□□□ 0.43
SMARCAL1-210ENST00000445153 TCP10Q12799 353 aa17.72■□□□□ 0.43
SMARCAL1-210ENST00000445153 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms