RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ZNF165P49910 485 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 TNNT1P13805 278 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 GYG1P46976 350 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 CTSWP56202 376 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 DHX8Q14562 1220 aaKnown RBP12.23□□□□□ -0.45
TOP3B-210ENST00000444502 CATIPQ7Z7H3 387 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
TOP3B-210ENST00000444502 GRM1Q13255 1194 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.45
TOP3B-210ENST00000444502 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 SLC26A6Q9BXS9 759 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 SEC31BQ9NQW1 1179 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 DDX19AQ9NUU7 478 aaKnown RBP12.23□□□□□ -0.45
TOP3B-210ENST00000444502 MTMR6Q9Y217 621 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 GJA3Q9Y6H8 435 aa12.23□□□□□ -0.45
TOP3B-210ENST00000444502 RGS12O14924 1447 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 KRT18P05783 430 aaKnown RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF500O60304 480 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 CHGBP05060 677 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 GTF2F1P35269 517 aaKnown RBP eCLIP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 TXLNAP40222 546 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■□□□□ 9
TOP3B-210ENST00000444502 ANO6Q4KMQ2 910 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ANKRD2Q9GZV1 360 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ARMT1Q9H993 441 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 H0YIN7 160 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ADORA1P30542 326 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF76P36508 570 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 MTX1Q13505 466 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 HLFQ16534 295 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF772Q68DY9 489 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-210ENST00000444502 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
TOP3B-210ENST00000444502 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 SNAP23O00161 211 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 WTAPQ15007 396 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 OLFM4Q6UX06 510 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 KAT14Q9H8E8 782 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 PI16Q6UXB8 463 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 PDILTQ8N807 584 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-210ENST00000444502 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
TOP3B-210ENST00000444502 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.46
TOP3B-210ENST00000444502 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.46
TOP3B-210ENST00000444502 HAUS7Q99871 368 aa12.21□□□□□ -0.46
TOP3B-210ENST00000444502 MYO1BO43795 1136 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 CYP21A2P08686 494 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
TOP3B-210ENST00000444502 BCAMP50895 628 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 LPIN2Q92539 896 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
TOP3B-210ENST00000444502 GPAA1O43292 621 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 ANKRD20A12PQ8NF67 263 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 NLRP5P59047 1200 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 TYRO3Q06418 890 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 ESR2Q92731 530 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
TOP3B-210ENST00000444502 PCCAP05165 728 aaPredicted RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 GSTO1P78417 241 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 HS1BP3Q53T59 392 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 ZBTB43O43298 467 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 TPM3P06753 285 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 CABP5Q9NP86 173 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 E7EWF7 191 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 SERPINC1P01008 464 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 IFIT1BQ5T764 474 aaKnown RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 B4E1Z4 1266 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 SSRP1Q08945 709 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms