RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
SMPD4P1-203ENST00000443839 EYA3Q99504 573 aa11.35□□□□□ -0.59
SMPD4P1-203ENST00000443839 PPP1R1BQ9UD71 204 aaPredicted RBP11.35□□□□□ -0.59
SMPD4P1-203ENST00000443839 DLEC1Q9Y238 1755 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 G3V3G9 751 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 APPP05067 770 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 PRDX5P30044 214 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 DZIP1Q86YF9 867 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 COA1Q9GZY4 146 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 CTNNA3Q9UI47 895 aa11.34□□□□□ -0.59
SMPD4P1-203ENST00000443839 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.59
SMPD4P1-203ENST00000443839 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 C21orf2O43822 256 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 MECOMQ03112 1051 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 KRT32Q14532 448 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 NSUN4Q96CB9 384 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 ARMT1Q9H993 441 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 SALL1Q9NSC2 1324 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 HSP90AA1P07900 732 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 CYP21A2P08686 494 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 PSMA5P28066 241 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 NBR1Q14596 966 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 C7orf43Q8WVR3 580 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 CCDC88AQ3V6T2 1871 aa11.33□□□□□ -0.6
SMPD4P1-203ENST00000443839 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 FOXP2O15409 715 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TGFB2P61812 414 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TM6SF1Q9BZW5 370 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TAF6LQ9Y6J9 622 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 FGAP02671 866 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 GNAT2P19087 354 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 KCNA3P22001 575 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 MCM2P49736 904 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 MFSD14BQ5SR56 506 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TTLL5Q6EMB2 1281 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 ZNF384Q8TF68 577 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
SMPD4P1-203ENST00000443839 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 IGSF3O75054 1194 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 GTF2IP78347 998 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 SUPT20HQ8NEM7 779 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 SLC4A4Q9Y6R1 1079 aa11.31□□□□□ -0.6
SMPD4P1-203ENST00000443839 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 CPA1P15085 419 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 HAND2P61296 217 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 GSTO1P78417 241 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 NAPBQ9H115 298 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 CHD4Q14839 1912 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 ZNF213O14771 459 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 TDO2P48775 406 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 RIOK1Q9BRS2 568 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 SLKQ9H2G2 1235 aaPredicted RBP11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
SMPD4P1-203ENST00000443839 AATFQ9NY61 560 aaKnown RBP eCLIP11.3□□□□□ -0.63e-6■■■□□ 18.2
SMPD4P1-203ENST00000443839 PRKAB2O43741 272 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 AOC3Q16853 763 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 PODNQ7Z5L7 613 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 SNED1Q8TER0 1413 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 UTRNP46939 3433 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 E7EWF7 191 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
SMPD4P1-203ENST00000443839 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms