RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 L1RE1Q9UN81 338 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 USP5P45974 858 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 IRAK1P51617 712 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 ODF2Q5BJF6 829 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 WAPLQ7Z5K2 1190 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 N4BP2L2Q92802 583 aaPredicted RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 NFE2L3Q9Y4A8 694 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 TTC19Q6DKK2 380 aaPredicted RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 TARSL2A2RTX5 802 aaKnown RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 A0A0D9SFI3 127 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 PI4KAP2A4QPH2 592 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.55e-6■■■■□ 23.6
HERC1-201ENST00000443617 VSNL1P62760 191 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 REXO1L1PQ8IX06 675 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 PI4KAP1Q8N8J0 262 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 MLKLQ8NB16 471 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 CTAGE1Q96RT6 745 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 FOXO3O43524 673 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 ZMYND10O75800 440 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 DDX58O95786 925 aaKnown RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 SAMM50Q9Y512 469 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 CTTNBP2Q8WZ74 1663 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 CHUKO15111 745 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 MATR3P43243 847 aaKnown RBP eCLIP5.69□□□□□ -1.53e-6■■■□□ 19.2
HERC1-201ENST00000443617 KIFC2Q96AC6 838 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 CCDC51Q96ER9 411 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 SPA17Q15506 151 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 POLR3EQ9NVU0 708 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 NECTIN1Q15223 517 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 TSGA10IPQ3SY00 556 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 RALYLQ86SE5 291 aaKnown RBP5.69□□□□□ -1.5
HERC1-201ENST00000443617 SOWAHDA6NJG2 315 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 CUTAO60888 179 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 RIMS2Q9UQ26 1411 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 ALDH1L1O75891 902 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 SMTNP53814 917 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 KANK3Q6NY19 840 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 ENGASEQ8NFI3 743 aa5.69□□□□□ -1.5
HERC1-201ENST00000443617 PPP1R12AO14974 1030 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 SLC8A1P32418 973 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 IDI1Q13907 227 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 RBBP5Q15291 538 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 PCMTD1Q96MG8 357 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 SLF1Q9BQI6 1058 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 NSUN7Q8NE18 718 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 SUGCTQ9HAC7 445 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 CLIC4Q9Y696 253 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 GNAT3A8MTJ3 354 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 PA2G4Q9UQ80 394 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 ZFYVE9O95405 1425 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 SLC39A14Q15043 492 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 CCDC61Q9Y6R9 512 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 TRPM1Q7Z4N2 1603 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 FRMD3A2A2Y4 597 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 ADD1P35611 737 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 NFATC2IPQ8NCF5 419 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 CPSF2Q9P2I0 782 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 MYO1AQ9UBC5 1043 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 C14orf37Q86TY3 774 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 STAG1Q8WVM7 1258 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 ANKZF1Q9H8Y5 726 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 GOLGA8KD6RF30 607 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 SSR1P43307 286 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 LONRF3Q496Y0 759 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 MSL3Q8N5Y2 521 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 JAKMIP2Q96AA8 810 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 JADE2Q9NQC1 790 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 YEATS2Q9ULM3 1422 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 KIF3CO14782 793 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 NEXNQ0ZGT2 675 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 ZKSCAN8Q15776 578 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 MRPL44Q9H9J2 332 aaKnown RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 MAGEC2Q9UBF1 373 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 EIF3HO15372 352 aaKnown RBP eCLIP5.68□□□□□ -1.52e-6■■■■□ 19.8
HERC1-201ENST00000443617 LINC00301Q8NCQ3 95 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 POLR1AO95602 1720 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 ELF1P32519 619 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 MYOM2P54296 1465 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 MAATS1Q7Z4T9 603 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.68□□□□□ -1.5
HERC1-201ENST00000443617 ADGRG1Q9Y653 693 aa5.68□□□□□ -1.5
HERC1-201ENST00000443617 SCP2P22307 547 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 ACTN3Q08043 901 aaPredicted RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 ARHGEF25Q86VW2 580 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 SEC62Q99442 399 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 C19orf44Q9H6X5 657 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 ST3GAL1Q11201 340 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 MTHFSDQ2M296 383 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 TTC39AQ5SRH9 613 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 IFT81Q8WYA0 676 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 DUOX2Q9NRD8 1548 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 TMEM232C9JQI7 657 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 GCFC2P16383 781 aaKnown RBP5.67□□□□□ -1.5
HERC1-201ENST00000443617 RBL2Q08999 1139 aa5.67□□□□□ -1.5
HERC1-201ENST00000443617 IQCA1Q86XH1 822 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms