RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 TIMM10P62072 90 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 CFAP100Q494V2 611 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
HLA-DQB1-206ENST00000443574 DOCK2Q92608 1830 aa12.71□□□□□ -0.38
HLA-DQB1-206ENST00000443574 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ADM5C9JUS6 153 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TRAF5O00463 557 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 USP48Q86UV5 1035 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB1-206ENST00000443574 MYH7P12883 1935 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ARID4AP29374 1257 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CRKP46108 304 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 AAMPQ13685 434 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 RASGRF1Q13972 1273 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 KLRG1Q96E93 195 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TNNI2P48788 182 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 HTRA3P83110 453 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 C2orf69Q8N8R5 385 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ZBED3Q96IU2 234 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ABCF2Q9UG63 623 aa12.68□□□□□ -0.38
HLA-DQB1-206ENST00000443574 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ECE1P42892 770 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 FKBP1BP68106 108 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 HHIPL2Q6UWX4 724 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 AACSQ86V21 672 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 APBB1O00213 710 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 IGSF3O75054 1194 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 IFIT2P09913 472 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 PRDX5P30044 214 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ERICH6Q7L0X2 663 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 PRMT6Q96LA8 375 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 MKRN1Q9UHC7 482 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 OTOFQ9HC10 1997 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 GSTO1P78417 241 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 DEFB115Q30KQ5 88 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CST9Q5W186 159 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SAPCD2Q86UD0 394 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 IL1RAPL2Q9NP60 686 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-206ENST00000443574 MCAMP43121 646 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 HUNKP57058 714 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 GRIK5Q16478 980 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 LAMB1P07942 1786 aa12.64□□□□□ -0.39
HLA-DQB1-206ENST00000443574 LDHCP07864 332 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms