RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 ME3Q16798 604 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 JAG2Q9Y219 1238 aa17.35■□□□□ 0.37
LINC00299-202ENST00000442956 NAA16Q6N069 864 aaPredicted RBP17.34■□□□□ 0.37
LINC00299-202ENST00000442956 ANKRD31Q8N7Z5 1873 aa17.34■□□□□ 0.37
LINC00299-202ENST00000442956 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
LINC00299-202ENST00000442956 TBC1D16Q8TBP0 767 aa17.34■□□□□ 0.37
LINC00299-202ENST00000442956 ATP6V0A2Q9Y487 856 aa17.34■□□□□ 0.37
LINC00299-202ENST00000442956 GNAT2P19087 354 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 ALX1Q15699 326 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 Q6ZUG5 572 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 CCDC83Q8IWF9 413 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 ZNF384Q8TF68 577 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 POLLQ9UGP5 575 aa17.33■□□□□ 0.37
LINC00299-202ENST00000442956 ALDH1B1P30837 517 aa17.33■□□□□ 0.36
LINC00299-202ENST00000442956 MASTLQ96GX5 879 aa17.33■□□□□ 0.36
LINC00299-202ENST00000442956 LRRC2Q9BYS8 371 aa17.33■□□□□ 0.36
LINC00299-202ENST00000442956 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
LINC00299-202ENST00000442956 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.36
LINC00299-202ENST00000442956 MAGEB6P1A0A0J9YX57 407 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 GSG1L2A8MUP6 293 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 PRKAB2O43741 272 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 PRDX5P30044 214 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 FGD1P98174 961 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 EXOSC10Q01780 885 aaKnown RBP17.32■□□□□ 0.36
LINC00299-202ENST00000442956 MECOMQ03112 1051 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 NECAB1Q8N987 351 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
LINC00299-202ENST00000442956 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 MCM4P33991 863 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 NBPF3Q9H094 633 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 NAPBQ9H115 298 aa17.32■□□□□ 0.36
LINC00299-202ENST00000442956 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 ST3GAL1Q11201 340 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 C2CD5Q86YS7 1000 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 WDR66Q8TBY9 1149 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 BRF1Q92994 677 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
LINC00299-202ENST00000442956 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00299-202ENST00000442956 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
LINC00299-202ENST00000442956 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 CD209Q9NNX6 404 aa17.31■□□□□ 0.36
LINC00299-202ENST00000442956 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
LINC00299-202ENST00000442956 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 TBC1D10CQ8IV04 446 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 TDO2P48775 406 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
LINC00299-202ENST00000442956 NCOA7Q8NI08 942 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 GBP4Q96PP9 640 aa17.3■□□□□ 0.36
LINC00299-202ENST00000442956 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 H0YIN7 160 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 IL1R1P14778 569 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 DYNLL1P63167 89 aaKnown RBP17.29■□□□□ 0.36
LINC00299-202ENST00000442956 TRDNQ13061 729 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 STK3Q13188 491 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
LINC00299-202ENST00000442956 MB21D2Q8IYB1 491 aaPredicted RBP17.29■□□□□ 0.36
LINC00299-202ENST00000442956 MPNDQ8N594 471 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 AGXT2Q9BYV1 514 aa17.29■□□□□ 0.36
LINC00299-202ENST00000442956 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
LINC00299-202ENST00000442956 MCM5P33992 734 aa17.28■□□□□ 0.36
LINC00299-202ENST00000442956 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
LINC00299-202ENST00000442956 SDR42E1Q8WUS8 393 aa17.28■□□□□ 0.36
LINC00299-202ENST00000442956 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
LINC00299-202ENST00000442956 LRRC37AA6NMS7 1700 aa17.28■□□□□ 0.36
LINC00299-202ENST00000442956 STYK1Q6J9G0 422 aa17.27■□□□□ 0.36
LINC00299-202ENST00000442956 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
LINC00299-202ENST00000442956 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.36
LINC00299-202ENST00000442956 PRC1O43663 620 aa17.27■□□□□ 0.35
LINC00299-202ENST00000442956 DTNBO60941 627 aa17.27■□□□□ 0.35
LINC00299-202ENST00000442956 BRD1O95696 1058 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 GJB2P29033 226 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 CHRNA5P30532 468 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 APOBRQ0VD83 1088 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 FOXD4L5Q5VV16 416 aaPredicted RBP17.26■□□□□ 0.35
LINC00299-202ENST00000442956 CLEC17AQ6ZS10 378 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 FOXD4L4Q8WXT5 416 aaPredicted RBP17.26■□□□□ 0.35
LINC00299-202ENST00000442956 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00299-202ENST00000442956 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 ANTXR2P58335 489 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 GRIK5Q16478 980 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
LINC00299-202ENST00000442956 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 DDX11L8A8MPP1 907 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 IGSF3O75054 1194 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
LINC00299-202ENST00000442956 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
LINC00299-202ENST00000442956 GPHNQ9NQX3 736 aaPredicted RBP17.25■□□□□ 0.35
LINC00299-202ENST00000442956 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
LINC00299-202ENST00000442956 NEDD4P46934 1319 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms