RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
SEMA3B-207ENST00000441915 PI16Q6UXB8 463 aa19.17■□□□□ 0.66
SEMA3B-207ENST00000441915 GSDMDP57764 484 aa19.17■□□□□ 0.66
SEMA3B-207ENST00000441915 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
SEMA3B-207ENST00000441915 RAB11FIP4Q86YS3 637 aa19.17■□□□□ 0.66
SEMA3B-207ENST00000441915 METTL24Q5JXM2 366 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 BPIFA3Q9BQP9 254 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 NCBP1Q09161 790 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 PTPN14Q15678 1187 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 DPCR1Q3MIW9 517 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 SLC3A2P08195 630 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 ANO1Q5XXA6 986 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 LDHAL6AQ6ZMR3 332 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 GJB4Q9NTQ9 266 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 TMOD3Q9NYL9 352 aa19.16■□□□□ 0.66
SEMA3B-207ENST00000441915 ZNF202O95125 648 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 CCZ1BP86790 482 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 CCZ1P86791 482 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 KIF23Q02241 960 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 CARD10Q9BWT7 1032 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 TEX13AQ9BXU3 409 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 IMPACTQ9P2X3 320 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 COL5A2P05997 1499 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 STRCP1A6NGW2 1772 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 MCAMP43121 646 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 CBX1P83916 185 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 RGS22Q8NE09 1264 aa19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 ANGEL1Q9UNK9 670 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-207ENST00000441915 USP27XA6NNY8 438 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 KIF28PB7ZC32 967 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 ZSCAN20P17040 1043 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 TPM4P67936 248 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 CMA1P23946 247 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 ADD2P35612 726 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 TTF1Q15361 905 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 NYAP1Q6ZVC0 841 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 OSBPL5Q9H0X9 879 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 RIPOR2Q9Y4F9 1068 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 MYH7P12883 1935 aa19.14■□□□□ 0.65
SEMA3B-207ENST00000441915 NEDD4P46934 1319 aa19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 CDKL5O76039 1030 aa19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 ITGA6P23229 1130 aa19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 METAP2P50579 478 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 ZMYM6O95789 1325 aa19.13■□□□□ 0.65
SEMA3B-207ENST00000441915 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 APPP05067 770 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 PFKFB1P16118 471 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 NLRP12P59046 1061 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 CPLX2Q6PUV4 134 aaKnown RBP19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 CNNM1Q9NRU3 951 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 SMC2O95347 1197 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 STARD3NLO95772 234 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 SLC39A14Q15043 492 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 GIGYF2Q6Y7W6 1299 aaKnown RBP19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 BRINP3Q76B58 766 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 CCAR2Q8N163 923 aaKnown RBP19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 ALG1Q9BT22 464 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 CDHR2Q9BYE9 1310 aa19.12■□□□□ 0.65
SEMA3B-207ENST00000441915 DDX60Q8IY21 1712 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 BIN1O00499 593 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 U2AF2P26368 475 aaKnown RBP eCLIP19.11■□□□□ 0.651e-14■□□□□ 8.7
SEMA3B-207ENST00000441915 TTLL11Q8NHH1 800 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 TRMT1Q9NXH9 659 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 ANKRD18BA2A2Z9 1011 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 XPO4Q9C0E2 1151 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 NBPF3Q9H094 633 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 GREM2Q9H772 168 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 MAP3K15Q6ZN16 1313 aa19.11■□□□□ 0.65
SEMA3B-207ENST00000441915 IDH1O75874 414 aaKnown RBP19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 MARCKSP29966 332 aaPredicted RBP19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 GNL2Q13823 731 aaKnown RBP19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 UBE3CQ15386 1083 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 VPS37DQ86XT2 251 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 JMYQ8N9B5 988 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 IFNKQ9P0W0 207 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 TBC1D10CQ8IV04 446 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 TIGD1Q96MW7 591 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 FEZ1Q99689 392 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
SEMA3B-207ENST00000441915 KIF2AO00139 706 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 SH2B2O14492 632 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 WDHD1O75717 1129 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 GPTP24298 496 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 EVA1CP58658 441 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 PDE4CQ08493 712 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 DHX8Q14562 1220 aaKnown RBP19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 CYB5R4Q7L1T6 521 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 CCDC150Q8NCX0 1101 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 ASAP1Q9ULH1 1129 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 SPDYE4A6NLX3 237 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 ATRNO75882 1429 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms