RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 R3HDMLQ9H3Y0 253 aa14.58□□□□□ -0.08
UBE2D4-204ENST00000440899 IQSEC3Q9UPP2 1182 aaPredicted RBP14.58□□□□□ -0.08
UBE2D4-204ENST00000440899 IFIT1P09914 478 aaKnown RBP14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 TNNI2P48788 182 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 KLHDC4Q8TBB5 520 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 MRIQ9BWK5 157 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 SMC4Q9NTJ3 1288 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 HPS5Q9UPZ3 1129 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 TNRC18O15417 2968 aaPredicted RBP14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 ECM29Q5VYK3 1845 aa14.57□□□□□ -0.08
UBE2D4-204ENST00000440899 TCP10L2B9ZVM9 353 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 BCAMP50895 628 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 SOX10P56693 466 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 PUM3Q15397 648 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 GRIK5Q16478 980 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 OTUD7BQ6GQQ9 843 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 TRMT2AQ8IZ69 625 aaKnown RBP14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 TEKT1Q969V4 418 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 CDCA7LQ96GN5 454 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 TEPSINQ96N21 525 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 KIF16BQ96L93 1317 aa14.56□□□□□ -0.08
UBE2D4-204ENST00000440899 EYA2O00167 538 aa14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 CT47B1P0C2W7 299 aaPredicted RBP14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 FGFR2P21802 821 aa14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 TMEM39BQ9GZU3 492 aa14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 SUGT1Q9Y2Z0 365 aa14.55□□□□□ -0.08
UBE2D4-204ENST00000440899 SLC5A1P13866 664 aa14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 GJA5P36382 358 aa14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 RFX5P48382 616 aaPredicted RBP14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 LPIN2Q92539 896 aa14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 ZDHHC15Q96MV8 337 aa14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 MAST3O60307 1309 aa14.54□□□□□ -0.08
UBE2D4-204ENST00000440899 TESPA1A2RU30 521 aaPredicted RBP14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 UBTFL1P0CB47 393 aaPredicted RBP14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 FKBP1CQ5VVH2 108 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 OPTNQ96CV9 577 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 TMOD2Q9NZR1 351 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 HDAC5Q9UQL6 1122 aa14.53□□□□□ -0.08
UBE2D4-204ENST00000440899 PDE4DIPQ5VU43 2346 aa14.52□□□□□ -0.08
UBE2D4-204ENST00000440899 HHIPL2Q6UWX4 724 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 ATG9AQ7Z3C6 839 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 FAM83AQ86UY5 434 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 WDR66Q8TBY9 1149 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 HOOK2Q96ED9 719 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 NOB1Q9ULX3 412 aaKnown RBP14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 CSADQ9Y600 493 aa14.52□□□□□ -0.09
UBE2D4-204ENST00000440899 CIAO1O76071 339 aa14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 CRHR2Q13324 411 aa14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 MS4A4AQ96JQ5 239 aa14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 PTPN18Q99952 460 aa14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 API5Q9BZZ5 524 aaKnown RBP14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 CEP126Q9P2H0 1117 aa14.51□□□□□ -0.09
UBE2D4-204ENST00000440899 ARAP2Q8WZ64 1704 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 HTTP42858 3142 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 GTF2A2P52657 109 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 CACNB3P54284 484 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 VGLL4Q14135 290 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 OTOP1Q7RTM1 612 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 ERO1AQ96HE7 468 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 SIL1Q9H173 461 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 TRIM17Q9Y577 477 aa14.5□□□□□ -0.09
UBE2D4-204ENST00000440899 CCER2I3L3R5 266 aa14.49□□□□□ -0.09
UBE2D4-204ENST00000440899 ATP2B3Q16720 1220 aa14.49□□□□□ -0.09
UBE2D4-204ENST00000440899 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
UBE2D4-204ENST00000440899 BRI3BPQ8WY22 251 aa14.49□□□□□ -0.09
UBE2D4-204ENST00000440899 GNL3LQ9NVN8 582 aaKnown RBP14.49□□□□□ -0.09
UBE2D4-204ENST00000440899 CCL15-CCL14A0A0B4J2E2 113 aa14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 IL15P40933 162 aaPredicted RBP14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 SP3Q02447 781 aa14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 CCL15Q16663 113 aa14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 DCAF15Q66K64 600 aa14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
UBE2D4-204ENST00000440899 CENPFP49454 3210 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 SPDYE5A6NIY4 337 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 LDHBP07195 334 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 ERO1BQ86YB8 467 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 CD99L2Q8TCZ2 262 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 WRNIP1Q96S55 665 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 EFCC1Q9HA90 598 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 ZFYVE28Q9HCC9 887 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 LAMB1P07942 1786 aa14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
UBE2D4-204ENST00000440899 SEMA3EO15041 775 aa14.46□□□□□ -0.09
UBE2D4-204ENST00000440899 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
UBE2D4-204ENST00000440899 CETPP11597 493 aa14.46□□□□□ -0.09
UBE2D4-204ENST00000440899 ARHGEF6Q15052 776 aa14.46□□□□□ -0.09
UBE2D4-204ENST00000440899 TAF1CQ15572 869 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms