RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 E9PCH4 1651 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 SPTLC2O15270 562 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 IDH1O75874 414 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 PTH1RQ03431 593 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 HSP90AA4PQ58FG1 418 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 METTL24Q5JXM2 366 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 AP1ARQ63HQ0 302 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 CACNA2D4Q7Z3S7 1137 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 ANKRD24Q8TF21 1146 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 MAP3K5Q99683 1374 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 CLTCL1P53675 1640 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 A0A1B0GVL5 298 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 IVLP07476 585 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 SLC5A1P13866 664 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 MYBPC2Q14324 1141 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 ZC3H12AQ5D1E8 599 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 DHX32Q7L7V1 743 aaKnown RBP7.23□□□□□ -1.25
BDNF-211ENST00000439476 GIMAP7Q8NHV1 300 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 SLC24A3Q9HC58 644 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 TMOD2Q9NZR1 351 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 RIPOR2Q9Y4F9 1068 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 SLC12A7Q9Y666 1083 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 NCOA3Q9Y6Q9 1424 aa7.23□□□□□ -1.25
BDNF-211ENST00000439476 MAP3K4Q9Y6R4 1608 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 SETSIPP0DME0 302 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 MARCKSP29966 332 aaPredicted RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 HNRNPH2P55795 449 aaKnown RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 SNRKQ9NRH2 765 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.22□□□□□ -1.25
BDNF-211ENST00000439476 KIF1BO60333 1816 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 JAK2O60674 1132 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 NR1I2O75469 434 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 LDHCP07864 332 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 TTC31Q49AM3 519 aaPredicted RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 SPECC1LQ69YQ0 1117 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 CHST3Q7LGC8 479 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 MICALL1Q8N3F8 863 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 SMARCC1Q92922 1105 aaPredicted RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 LSG1Q9H089 658 aaKnown RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 ZSWIM6Q9HCJ5 1215 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 PRDM11Q9NQV5 511 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 NRBP1Q9UHY1 535 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 UQCRFS1P1P0C7P4 283 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 IFIT5Q13325 482 aaKnown RBP7.22□□□□□ -1.25
BDNF-211ENST00000439476 CATIPQ7Z7H3 387 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 FMNL3Q8IVF7 1028 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 CCDC82Q8N4S0 544 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 ZHX3Q9H4I2 956 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 TCP11L1Q9NUJ3 509 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 TPCN1Q9ULQ1 816 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 CCDC194A0A1B0GVG4 234 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 PRPHP41219 470 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 PHF8Q9UPP1 1060 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 RPS6KL1Q9Y6S9 549 aa7.22□□□□□ -1.25
BDNF-211ENST00000439476 NLRP1Q9C000 1473 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 KIF3CO14782 793 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 ZNF76P36508 570 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 IARSP41252 1262 aaKnown RBP7.21□□□□□ -1.25
BDNF-211ENST00000439476 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.25
BDNF-211ENST00000439476 MCM6Q14566 821 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 ADCK5Q3MIX3 580 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 ANKRD13DQ6ZTN6 518 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 TAX1BP1Q86VP1 789 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 NCOA7Q8NI08 942 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 BICC1Q9H694 974 aaKnown RBP7.21□□□□□ -1.25
BDNF-211ENST00000439476 PPP1R1BQ9UD71 204 aaPredicted RBP7.21□□□□□ -1.25
BDNF-211ENST00000439476 FRMD4BQ9Y2L6 1034 aa7.21□□□□□ -1.25
BDNF-211ENST00000439476 PEX14O75381 377 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CAPN15O75808 1086 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 COPS6Q7L5N1 327 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 MICU3Q86XE3 530 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 XAGE3Q8WTP9 111 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CALML4Q96GE6 196 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 UTP14AQ9BVJ6 771 aaKnown RBP7.21□□□□□ -1.26
BDNF-211ENST00000439476 A0A1B0GUL7 405 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 GOLGA8AA7E2F4 631 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CCDC175P0C221 793 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 TUBB2AQ13885 445 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 DYDC1Q8WWB3 177 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 TUBB2BQ9BVA1 445 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CENPHQ9H3R5 247 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 CNNM2Q9H8M5 875 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 BABAM1Q9NWV8 329 aa7.21□□□□□ -1.26
BDNF-211ENST00000439476 STAMBPO95630 424 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 SSBP05455 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
BDNF-211ENST00000439476 SLFN14P0C7P3 912 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 GNAQP50148 359 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 METAP2P50579 478 aaKnown RBP eCLIP7.2□□□□□ -1.26
BDNF-211ENST00000439476 TERF2Q15554 542 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 TET3O43151 1660 aa7.2□□□□□ -1.26
BDNF-211ENST00000439476 ANKRD18BA2A2Z9 1011 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms