RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF594Q96JF6 807 aaPredicted RBP18.11■□□□□ 0.49
DHFR-201ENST00000439211 PAG1Q9NWQ8 432 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
DHFR-201ENST00000439211 ARHGEF25Q86VW2 580 aa18.11■□□□□ 0.49
DHFR-201ENST00000439211 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 STX1AQ16623 288 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 LRRFIP1Q32MZ4 808 aaKnown RBP18.1■□□□□ 0.49
DHFR-201ENST00000439211 TMED8Q6PL24 325 aaPredicted RBP18.1■□□□□ 0.49
DHFR-201ENST00000439211 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 SLC24A3Q9HC58 644 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 ANO10Q9NW15 660 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 ATP8B1O43520 1251 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 PLA2G4DQ86XP0 818 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 EFCAB13Q8IY85 973 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 ATP5JP18859 108 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
DHFR-201ENST00000439211 C8orf76Q96K31 380 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
DHFR-201ENST00000439211 ZBTB12Q9Y330 459 aaPredicted RBP18.1■□□□□ 0.49
DHFR-201ENST00000439211 KIAA0754O94854 1291 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 ETF1P62495 437 aaKnown RBP18.09■□□□□ 0.49
DHFR-201ENST00000439211 NYAP1Q6ZVC0 841 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 AOPEPQ8N6M6 819 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 JPH2Q9BR39 696 aaPredicted RBP18.09■□□□□ 0.49
DHFR-201ENST00000439211 RABEP2Q9H5N1 569 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 TADA2BQ86TJ2 420 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 FUCA2Q9BTY2 467 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 TCHHQ07283 1943 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 SSR1P43307 286 aaKnown RBP18.09■□□□□ 0.49
DHFR-201ENST00000439211 PPP2R3AQ06190 1150 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 ST3GAL1Q11201 340 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 CC2D1AQ6P1N0 951 aaPredicted RBP18.09■□□□□ 0.49
DHFR-201ENST00000439211 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
DHFR-201ENST00000439211 A0A1B0GVL5 298 aa18.08■□□□□ 0.49
DHFR-201ENST00000439211 SCRN1Q12765 414 aa18.08■□□□□ 0.49
DHFR-201ENST00000439211 KAZALD1Q96I82 304 aa18.08■□□□□ 0.49
DHFR-201ENST00000439211 EFCAB8A8MWE9 144 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 CAVIN2O95810 425 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 TOM1L2Q6ZVM7 507 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 FAN1Q9Y2M0 1017 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 C3P01024 1663 aa18.08■□□□□ 0.48
DHFR-201ENST00000439211 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 CPLX2Q6PUV4 134 aaKnown RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 CCDC150Q8NCX0 1101 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 A0A087WUV0 522 aaPredicted RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 EBAG9O00559 213 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 FOXR1Q6PIV2 292 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 KBTBD3Q8NAB2 608 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 USP28Q96RU2 1077 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 RBM28Q9NW13 759 aaKnown RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 CTAGE5O15320 804 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 LONRF2Q1L5Z9 754 aa18.07■□□□□ 0.48
DHFR-201ENST00000439211 GPR161Q8N6U8 529 aaKnown RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
DHFR-201ENST00000439211 PTPN12Q05209 780 aaKnown RBP18.06■□□□□ 0.48
DHFR-201ENST00000439211 GOLGA1Q92805 767 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
DHFR-201ENST00000439211 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
DHFR-201ENST00000439211 TRIM29Q14134 588 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
DHFR-201ENST00000439211 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
DHFR-201ENST00000439211 HDXQ7Z353 690 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 MRFAP1L1Q96HT8 127 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 ZSCAN12O43309 604 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
DHFR-201ENST00000439211 COPRSQ9NQ92 184 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 FAM53CQ9NYF3 392 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 EGFL6Q8IUX8 553 aa18.05■□□□□ 0.48
DHFR-201ENST00000439211 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 SERPINC1P01008 464 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 CNNM3Q8NE01 707 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 UTP14AQ9BVJ6 771 aaKnown RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 PUF60Q9UHX1 559 aaKnown RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 MARCKSP29966 332 aaPredicted RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 CDR1P51861 262 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 EVA1CP58658 441 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 PARD6BQ9BYG5 372 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 MED4Q9NPJ6 270 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 SHTN1A0MZ66 631 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 A1BGP04217 495 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 TUBB4AP04350 444 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 CORO7P57737 925 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 CEP89Q96ST8 783 aa18.04■□□□□ 0.48
DHFR-201ENST00000439211 ECM2O94769 699 aaPredicted RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 RRP12Q5JTH9 1297 aaKnown RBP18.04■□□□□ 0.48
DHFR-201ENST00000439211 MRPS27Q92552 414 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms