RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 GTF3C6Q969F1 213 aa17.76■□□□□ 0.43
LINC00163-202ENST00000439088 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
LINC00163-202ENST00000439088 MCM5P33992 734 aa17.75■□□□□ 0.43
LINC00163-202ENST00000439088 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
LINC00163-202ENST00000439088 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
LINC00163-202ENST00000439088 STK3Q13188 491 aa17.75■□□□□ 0.43
LINC00163-202ENST00000439088 C15orf52Q6ZUT6 534 aaKnown RBP17.75■□□□□ 0.43
LINC00163-202ENST00000439088 TXNRD3Q86VQ6 643 aa17.75■□□□□ 0.43
LINC00163-202ENST00000439088 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
LINC00163-202ENST00000439088 WDR19Q8NEZ3 1342 aa17.75■□□□□ 0.43
LINC00163-202ENST00000439088 PFKFB2O60825 505 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 RALYLQ86SE5 291 aaKnown RBP17.74■□□□□ 0.43
LINC00163-202ENST00000439088 LCORLQ8N3X6 602 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
LINC00163-202ENST00000439088 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 EVCP57679 992 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 TRDNQ13061 729 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 TMED8Q6PL24 325 aaPredicted RBP17.74■□□□□ 0.43
LINC00163-202ENST00000439088 POTEAQ6S8J7 498 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 BRIP1Q9BX63 1249 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 NAPBQ9H115 298 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 SLC4A4Q9Y6R1 1079 aa17.74■□□□□ 0.43
LINC00163-202ENST00000439088 MAGEB6P1A0A0J9YX57 407 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 PDCP20941 246 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 APOBRQ0VD83 1088 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 CHST3Q7LGC8 479 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 EPB41L4AQ9HCS5 686 aaPredicted RBP17.73■□□□□ 0.43
LINC00163-202ENST00000439088 LMBRD1Q9NUN5 540 aa17.73■□□□□ 0.43
LINC00163-202ENST00000439088 IGSF3O75054 1194 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 GPSM2P81274 684 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 NAA16Q6N069 864 aaPredicted RBP17.72■□□□□ 0.43
LINC00163-202ENST00000439088 TMC4Q7Z404 712 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 ADGRA1Q86SQ6 560 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 LLPHQ9BRT6 129 aaKnown RBP17.72■□□□□ 0.43
LINC00163-202ENST00000439088 PRC1O43663 620 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 PRKAB2O43741 272 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
LINC00163-202ENST00000439088 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
LINC00163-202ENST00000439088 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
LINC00163-202ENST00000439088 RGPD3A6NKT7 1758 aaPredicted RBP17.71■□□□□ 0.43
LINC00163-202ENST00000439088 RGPD4Q7Z3J3 1758 aa17.71■□□□□ 0.43
LINC00163-202ENST00000439088 SCRN1Q12765 414 aa17.71■□□□□ 0.43
LINC00163-202ENST00000439088 TDRD7Q8NHU6 1098 aaKnown RBP17.71■□□□□ 0.43
LINC00163-202ENST00000439088 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
LINC00163-202ENST00000439088 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
LINC00163-202ENST00000439088 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
LINC00163-202ENST00000439088 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
LINC00163-202ENST00000439088 CACNA1SQ13698 1873 aa17.71■□□□□ 0.43
LINC00163-202ENST00000439088 F13A1P00488 732 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.42
LINC00163-202ENST00000439088 ANTXR2P58335 489 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 SPTY2D1Q68D10 685 aaPredicted RBP17.71■□□□□ 0.42
LINC00163-202ENST00000439088 ZNF804AQ7Z570 1209 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 ZNF384Q8TF68 577 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 ATP6V1DQ9Y5K8 247 aa17.71■□□□□ 0.42
LINC00163-202ENST00000439088 PRPF40AO75400 957 aaKnown RBP17.7■□□□□ 0.42
LINC00163-202ENST00000439088 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
LINC00163-202ENST00000439088 KLHL40Q2TBA0 621 aa17.7■□□□□ 0.42
LINC00163-202ENST00000439088 GGA1Q9UJY5 639 aa17.7■□□□□ 0.42
LINC00163-202ENST00000439088 MYH13Q9UKX3 1938 aa17.7■□□□□ 0.42
LINC00163-202ENST00000439088 SALL1Q9NSC2 1324 aa17.7■□□□□ 0.42
LINC00163-202ENST00000439088 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 TDO2P48775 406 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 MECOMQ03112 1051 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 PARP3Q9Y6F1 533 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 DTNBO60941 627 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
LINC00163-202ENST00000439088 DDX49Q9Y6V7 483 aaKnown RBP17.69■□□□□ 0.42
LINC00163-202ENST00000439088 UFL1O94874 794 aa17.68■□□□□ 0.42
LINC00163-202ENST00000439088 MMP10P09238 476 aa17.68■□□□□ 0.42
LINC00163-202ENST00000439088 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
LINC00163-202ENST00000439088 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
LINC00163-202ENST00000439088 CNNM2Q9H8M5 875 aa17.68■□□□□ 0.42
LINC00163-202ENST00000439088 PDE6BP35913 854 aa17.68■□□□□ 0.42
LINC00163-202ENST00000439088 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
LINC00163-202ENST00000439088 JAK2O60674 1132 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 SRGNP10124 158 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 NPR1P16066 1061 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 CTDSPL2Q05D32 466 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 KRT23Q9C075 422 aa17.67■□□□□ 0.42
LINC00163-202ENST00000439088 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
LINC00163-202ENST00000439088 B4E1Z4 1266 aa17.66■□□□□ 0.42
LINC00163-202ENST00000439088 PRDX5P30044 214 aa17.66■□□□□ 0.42
LINC00163-202ENST00000439088 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
LINC00163-202ENST00000439088 CCT2P78371 535 aaKnown RBP17.66■□□□□ 0.42
LINC00163-202ENST00000439088 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
LINC00163-202ENST00000439088 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms