RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FAM95CA0A1B0GW59 222 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 NEFLP07196 543 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 USP11P51784 963 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 SOX4Q06945 474 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 NFKBIBQ15653 356 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 ECM1Q16610 540 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 SPRED3Q2MJR0 410 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 USPL1Q5W0Q7 1092 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 CDPF1Q6NVV7 123 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 FBXL6Q8N531 539 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 C2CD4AQ8NCU7 369 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 GIMAP7Q8NHV1 300 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 FBLIM1Q8WUP2 373 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 ATG3Q9NT62 314 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 PIM2Q9P1W9 311 aa5.88□□□□□ -1.47
HMGB1P18-201ENST00000438801 WNT11O96014 354 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 CYP11A1P05108 521 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 F13BP05160 661 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 MAOBP27338 520 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 HOXA10P31260 410 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 ARHGAP4P98171 946 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 LEMD3Q9Y2U8 911 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 RIMBP3CA6NJZ7 1639 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 RIMBP3BA6NNM3 1639 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 RIMBP3Q9UFD9 1639 aa5.87□□□□□ -1.47
HMGB1P18-201ENST00000438801 NDUFB5O43674 189 aa5.86□□□□□ -1.47
HMGB1P18-201ENST00000438801 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
HMGB1P18-201ENST00000438801 KIAA0319Q5VV43 1072 aa5.86□□□□□ -1.47
HMGB1P18-201ENST00000438801 YIPF2Q9BWQ6 316 aa5.86□□□□□ -1.47
HMGB1P18-201ENST00000438801 PAX4O43316 350 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 CPNE3O75131 537 aaKnown RBP5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 CTSBP07858 339 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 ADH5P11766 374 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 ORC1Q13415 861 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 POU4F3Q15319 338 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 CPSF6Q16630 551 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 HP1BP3Q5SSJ5 553 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 SHISA5Q8N114 240 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 EZH1Q92800 747 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 FAM129BQ96TA1 746 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 EHD4Q9H223 541 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 ZFYVE1Q9HBF4 777 aa5.85□□□□□ -1.47
HMGB1P18-201ENST00000438801 NISCHQ9Y2I1 1504 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 B3GALT4O96024 378 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 FOSL1P15407 271 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 ITPKAP23677 461 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 DDX54Q8TDD1 881 aaKnown RBP5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 CITED4Q96RK1 184 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 CORO1BQ9BR76 489 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 METTL22Q9BUU2 404 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 ZNF576Q9H609 170 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 NPHS2Q9NP85 383 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 ACTL7BQ9Y614 415 aa5.84□□□□□ -1.47
HMGB1P18-201ENST00000438801 ADMP35318 185 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 MSMPQ1L6U9 139 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 AKAP4Q5JQC9 854 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 ZAR1Q86SH2 424 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 TXNDC2Q86VQ3 553 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 TBC1D32Q96NH3 1257 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 TRIM56Q9BRZ2 755 aaKnown RBP5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 RAD18Q9NS91 495 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 PRKAG2Q9UGJ0 569 aa5.83□□□□□ -1.48
HMGB1P18-201ENST00000438801 HECW2Q9P2P5 1572 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 ECEL1O95672 775 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 NFICP08651 508 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 RAB6AP20340 208 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 MAP7Q14244 749 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 DYMQ7RTS9 669 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 GOLGA2P5Q9HBQ8 144 aa5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 ANGEL1Q9UNK9 670 aaKnown RBP5.82□□□□□ -1.48
HMGB1P18-201ENST00000438801 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 EIF1AYO14602 144 aaKnown RBP5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 GPR182O15218 404 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 CYP26A1O43174 497 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 IGHA2P01877 340 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 PTPN12Q05209 780 aaKnown RBP5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 TMC1Q8TDI8 760 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 GATA6Q92908 595 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 CCDC74AQ96AQ1 378 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 FMNL2Q96PY5 1086 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 NIF3L1Q9GZT8 377 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 DNAJC25Q9H1X3 360 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 SEMA6CQ9H3T2 930 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 ACSS3Q9H6R3 686 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 ABCB6Q9NP58 842 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 FAM105AQ9NUU6 356 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 AP4E1Q9UPM8 1137 aa5.81□□□□□ -1.48
HMGB1P18-201ENST00000438801 FAM170BA6NMN3 283 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 AOC2O75106 756 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 GADD45BO75293 160 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 TXKP42681 527 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 ASPAP45381 313 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 AP3B2Q13367 1082 aa5.8□□□□□ -1.48
HMGB1P18-201ENST00000438801 PDE3AQ14432 1141 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms