RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 MECOMQ03112 1051 aa23.25■■□□□ 1.31
CHRNA7-202ENST00000437966 NAA16Q6N069 864 aaPredicted RBP23.25■■□□□ 1.31
CHRNA7-202ENST00000437966 MPNDQ8N594 471 aa23.25■■□□□ 1.31
CHRNA7-202ENST00000437966 LARGE1O95461 756 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 GRIK5Q16478 980 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 LRRC2Q9BYS8 371 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 LIMCH1Q9UPQ0 1083 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 PDS5AQ29RF7 1337 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 PATL2C9JE40 543 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 IMMTQ16891 758 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 EPB41L4AQ9HCS5 686 aaPredicted RBP23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 SLC4A4Q9Y6R1 1079 aa23.24■■□□□ 1.31
CHRNA7-202ENST00000437966 MAGEB6P1A0A0J9YX57 407 aa23.23■■□□□ 1.31
CHRNA7-202ENST00000437966 DTNBO60941 627 aa23.23■■□□□ 1.31
CHRNA7-202ENST00000437966 ZBTB7AO95365 584 aa23.23■■□□□ 1.31
CHRNA7-202ENST00000437966 CUL4AQ13619 759 aa23.23■■□□□ 1.31
CHRNA7-202ENST00000437966 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
CHRNA7-202ENST00000437966 GSG1L2A8MUP6 293 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 ZNF213O14771 459 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 IFNL3Q8IZI9 196 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 MYH13Q9UKX3 1938 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 TOB2Q14106 344 aaPredicted RBP23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 CHST3Q7LGC8 479 aa23.22■■□□□ 1.31
CHRNA7-202ENST00000437966 CACNA1SQ13698 1873 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 IL1R1P14778 569 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 WDR66Q8TBY9 1149 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 ANP32EQ9BTT0 268 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 NBPF3Q9H094 633 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 TMX4Q9H1E5 349 aaPredicted RBP23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 TPCN1Q9ULQ1 816 aa23.21■■□□□ 1.31
CHRNA7-202ENST00000437966 LTBP1Q14766 1721 aa23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 NFKBIBQ15653 356 aa23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 DOK7Q18PE1 504 aa23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 Q6ZUG5 572 aa23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 RIOK1Q9BRS2 568 aaKnown RBP23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 ATF5Q9Y2D1 282 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-202ENST00000437966 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 SDR42E1Q8WUS8 393 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 INCENPQ9NQS7 918 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 LDHBP07195 334 aaKnown RBP23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 ME3Q16798 604 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 SPTY2D1Q68D10 685 aaPredicted RBP23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 DZIP1Q86YF9 867 aaKnown RBP23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 NAPBQ9H115 298 aa23.19■■□□□ 1.3
CHRNA7-202ENST00000437966 ALX1Q15699 326 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 DHX32Q7L7V1 743 aaKnown RBP23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 TBC1D10CQ8IV04 446 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 CNKSR1Q969H4 720 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 ALDH8A1Q9H2A2 487 aaPredicted RBP23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 AATFQ9NY61 560 aaKnown RBP eCLIP23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 SLX4Q8IY92 1834 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
CHRNA7-202ENST00000437966 GNAT2P19087 354 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 EXOSC10Q01780 885 aaKnown RBP23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 CTDSPL2Q05D32 466 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 CCDC83Q8IWF9 413 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 STK11IPQ8N1F8 1099 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 FBXW7Q969H0 707 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 CIZ1Q9ULV3 898 aaPredicted RBP23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 SALL1Q9NSC2 1324 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 ZBTB22O15209 634 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 TDO2P48775 406 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 PKP1Q13835 747 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 DIXDC1Q155Q3 683 aa23.17■■□□□ 1.3
CHRNA7-202ENST00000437966 LAMA4Q16363 1823 aa23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 GTF2IP78347 998 aa23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 ST3GAL1Q11201 340 aa23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 STK3Q13188 491 aa23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 TACC3Q9Y6A5 838 aa23.16■■□□□ 1.3
CHRNA7-202ENST00000437966 HMGB1P09429 215 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 FGD1P98174 961 aa23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 ANKRD1Q15327 319 aa23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 BRF1Q92994 677 aa23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 ZSCAN31Q96LW9 406 aaPredicted RBP23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 NACAP1Q9BZK3 213 aa23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 CWC22Q9HCG8 908 aaKnown RBP23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 GPHNQ9NQX3 736 aaPredicted RBP23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 C10orf71Q711Q0 1435 aa23.15■■□□□ 1.3
CHRNA7-202ENST00000437966 SMIM22K7EJ46 135 aa23.14■■□□□ 1.3
CHRNA7-202ENST00000437966 C7orf43Q8WVR3 580 aa23.14■■□□□ 1.3
CHRNA7-202ENST00000437966 INTS4Q96HW7 963 aaKnown RBP23.14■■□□□ 1.3
CHRNA7-202ENST00000437966 COA1Q9GZY4 146 aa23.14■■□□□ 1.3
CHRNA7-202ENST00000437966 C21orf2O43822 256 aa23.14■■□□□ 1.29
CHRNA7-202ENST00000437966 DPEP1P16444 411 aa23.14■■□□□ 1.29
CHRNA7-202ENST00000437966 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
CHRNA7-202ENST00000437966 MXD3Q9BW11 206 aa23.14■■□□□ 1.29
CHRNA7-202ENST00000437966 G3V3G9 751 aa23.13■■□□□ 1.29
CHRNA7-202ENST00000437966 RAB3GAP1Q15042 981 aa23.13■■□□□ 1.29
CHRNA7-202ENST00000437966 DCAF8Q5TAQ9 597 aa23.13■■□□□ 1.29
CHRNA7-202ENST00000437966 MB21D2Q8IYB1 491 aaPredicted RBP23.13■■□□□ 1.29
CHRNA7-202ENST00000437966 NCOA7Q8NI08 942 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms