RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 PUM3Q15397 648 aaKnown RBP11.14□□□□□ -0.63
CTDSPL-205ENST00000436654 TMEM39BQ9GZU3 492 aa11.14□□□□□ -0.63
CTDSPL-205ENST00000436654 SIL1Q9H173 461 aa11.14□□□□□ -0.63
CTDSPL-205ENST00000436654 MANSC4A6NHS7 340 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 EYA2O00167 538 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 IFIT1P09914 478 aaKnown RBP11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 FGFR2P21802 821 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 GJA5P36382 358 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 CACNB3P54284 484 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 SOX10P56693 466 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 TBC1D22AQ8WUA7 517 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 TEPSINQ96N21 525 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 ELP3Q9H9T3 547 aa11.13□□□□□ -0.63
CTDSPL-205ENST00000436654 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.639e-8■■□□□ 13.2
CTDSPL-205ENST00000436654 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 SLC5A1P13866 664 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 ANKRD13AQ8IZ07 590 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 LPIN2Q92539 896 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 TEKT1Q969V4 418 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
CTDSPL-205ENST00000436654 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 CASP8AP2Q9UKL3 1982 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 FKTNO75072 461 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 TNNI2P48788 182 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 RARSP54136 660 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 INHBEP58166 350 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 HDLBPQ00341 1268 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 MEIS3Q99687 375 aa11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 PA2G4Q9UQ80 394 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 LRRFIP2Q9Y608 721 aaKnown RBP11.11□□□□□ -0.63
CTDSPL-205ENST00000436654 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 UNCXA6NJT0 531 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 ATP2B3Q16720 1220 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 NOM1Q5C9Z4 860 aaKnown RBP11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 APOBEC3HQ6NTF7 200 aaKnown RBP11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 OPTNQ96CV9 577 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 ZDHHC15Q96MV8 337 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 CFHR5Q9BXR6 569 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 TMOD2Q9NZR1 351 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
CTDSPL-205ENST00000436654 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 VGLL4Q14135 290 aa11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 WDR66Q8TBY9 1149 aa11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 PTPN18Q99952 460 aa11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 MAST3O60307 1309 aa11.09□□□□□ -0.63
CTDSPL-205ENST00000436654 CIAO1O76071 339 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 PHKA1P46020 1223 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 CRHR2Q13324 411 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 OTUD7BQ6GQQ9 843 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 FBXO46Q6PJ61 603 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 CSADQ9Y600 493 aa11.08□□□□□ -0.64
CTDSPL-205ENST00000436654 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 PRDX5P30044 214 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 ADORA1P30542 326 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 IL15P40933 162 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 CCL15Q16663 113 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 BRI3BPQ8WY22 251 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 GNL3LQ9NVN8 582 aaKnown RBP11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 DAGLAQ9Y4D2 1042 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 TRIM17Q9Y577 477 aa11.07□□□□□ -0.64
CTDSPL-205ENST00000436654 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 LDHBP07195 334 aaKnown RBP11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 GNAI3P08754 354 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 TCP10Q12799 353 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 CDC42EP5Q6NZY7 148 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 OTOP1Q7RTM1 612 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 FAM83AQ86UY5 434 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 CD99L2Q8TCZ2 262 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 FRAT1Q92837 279 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 ZKSCAN4Q969J2 545 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
CTDSPL-205ENST00000436654 SPDYE5A6NIY4 337 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms