RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 EVI5LQ96CN4 794 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 TMX3Q96JJ7 454 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 METTL22Q9BUU2 404 aaPredicted RBP8.96□□□□□ -0.98
COL17A1-204ENST00000433822 GRPEL1Q9HAV7 217 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 ANO2Q9NQ90 1003 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 NRAPQ86VF7 1730 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 NWD2Q9ULI1 1742 aa8.96□□□□□ -0.98
COL17A1-204ENST00000433822 ARFGEF2Q9Y6D5 1785 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 SPTLC1O15269 473 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 MBD3O95983 291 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 XRCC6P12956 609 aaKnown RBP eCLIP8.95□□□□□ -0.98
COL17A1-204ENST00000433822 BAG6P46379 1132 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 RABL6Q3YEC7 729 aaPredicted RBP8.95□□□□□ -0.98
COL17A1-204ENST00000433822 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 RILPL2Q969X0 211 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 LSG1Q9H089 658 aaKnown RBP8.95□□□□□ -0.98
COL17A1-204ENST00000433822 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
COL17A1-204ENST00000433822 NEURL1BA8MQ27 555 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 ERVV-2B6SEH9 535 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 NR3C2P08235 984 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 BMP2P12643 396 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 GCKRQ14397 625 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
COL17A1-204ENST00000433822 AGERQ15109 404 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 AMHR2Q16671 573 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 BPHLQ86WA6 291 aaPredicted RBP8.94□□□□□ -0.98
COL17A1-204ENST00000433822 UNC5CLQ8IV45 518 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 TTC14Q96N46 770 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 ALDH8A1Q9H2A2 487 aaPredicted RBP8.94□□□□□ -0.98
COL17A1-204ENST00000433822 IL1RAPL2Q9NP60 686 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
COL17A1-204ENST00000433822 LMBRD1Q9NUN5 540 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 TNS2Q63HR2 1409 aa8.94□□□□□ -0.98
COL17A1-204ENST00000433822 F12P00748 615 aaPredicted RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 IFIT2P09913 472 aaKnown RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 GRM5P41594 1212 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 C1QTNF8P60827 252 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 PROSER3Q2NL68 480 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 TMEM87AQ8NBN3 555 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 SUCLG2Q96I99 432 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 ZSCAN31Q96LW9 406 aaPredicted RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 NLRP2Q9NX02 1062 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 ZDHHC9Q9Y397 364 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 DDX49Q9Y6V7 483 aaKnown RBP8.93□□□□□ -0.98
COL17A1-204ENST00000433822 WDR17Q8IZU2 1322 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 PCDH11XQ9BZA7 1347 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 PCDH11YQ9BZA8 1340 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 SPEF2Q9C093 1822 aa8.93□□□□□ -0.98
COL17A1-204ENST00000433822 AFDNP55196 1824 aaKnown RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 WDR33Q9C0J8 1336 aaKnown RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 CFAP99D6REC4 459 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 CYP27B1O15528 508 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 XPCQ01831 940 aaPredicted RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 EZH2Q15910 746 aaKnown RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 VPS53Q5VIR6 699 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 KRT27Q7Z3Y8 459 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 TTC5Q8N0Z6 440 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 MEIOBQ8N635 442 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 BICC1Q9H694 974 aaKnown RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 GPR108Q9NPR9 543 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 DIAPH3Q9NSV4 1193 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 HMG20BQ9P0W2 317 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 PALD1Q9ULE6 856 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.92□□□□□ -0.98
COL17A1-204ENST00000433822 SNX14Q9Y5W7 946 aa8.92□□□□□ -0.98
COL17A1-204ENST00000433822 COL5A2P05997 1499 aaPredicted RBP8.91□□□□□ -0.98
COL17A1-204ENST00000433822 DISP2A7MBM2 1401 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
COL17A1-204ENST00000433822 MED23Q9ULK4 1368 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 CCDC171Q6TFL3 1326 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 ZBTB7CA1YPR0 619 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 SASH1O94885 1247 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
COL17A1-204ENST00000433822 HS1BP3Q53T59 392 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 TSHZ3Q63HK5 1081 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 ZGPATQ8N5A5 531 aaKnown RBP8.91□□□□□ -0.98
COL17A1-204ENST00000433822 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
COL17A1-204ENST00000433822 PPP1R9BQ96SB3 815 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 LIMCH1Q9UPQ0 1083 aa8.91□□□□□ -0.98
COL17A1-204ENST00000433822 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms