RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 NPHP1O15259 732 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 MCM3P25205 808 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 C1orf131Q8NDD1 294 aaKnown RBP12.39□□□□□ -0.43
CCDC171-202ENST00000432954 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 ZMAT5Q9UDW3 170 aaKnown RBP12.39□□□□□ -0.43
CCDC171-202ENST00000432954 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
CCDC171-202ENST00000432954 CLCN2P51788 898 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC171-202ENST00000432954 GALNT17Q6IS24 598 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 SLC7A5P1Q8MH63 180 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 CNNM3Q8NE01 707 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 FAM71BQ8TC56 605 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 CLIP3Q96DZ5 547 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
CCDC171-202ENST00000432954 MYO1FO00160 1098 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 ATP9BO43861 1147 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 GNAT1P11488 350 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 HCLS1P14317 486 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 SYT1P21579 422 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 SNCBQ16143 134 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 ENOX2Q16206 610 aaKnown RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 BZW1Q7L1Q6 419 aaKnown RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 KIRREL3Q8IZU9 778 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 YIPF3Q9GZM5 350 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 PAIP2BQ9ULR5 123 aaKnown RBP12.38□□□□□ -0.43
CCDC171-202ENST00000432954 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
CCDC171-202ENST00000432954 TADA3O75528 432 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 CSE1LP55060 971 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 LRMPQ12912 555 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 EIF4A2Q14240 407 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 PABPC1LQ4VXU2 614 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 EVI5O60447 810 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 ATICP31939 592 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 RSPH3Q86UC2 560 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 LCA5Q86VQ0 697 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 SLC15A3Q8IY34 581 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 CTNNBL1Q8WYA6 563 aaPredicted RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 PMM1Q92871 262 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 MPP4Q96JB8 637 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 OXCT2Q9BYC2 517 aaPredicted RBP12.37□□□□□ -0.43
CCDC171-202ENST00000432954 COMMD8Q9NX08 183 aa12.37□□□□□ -0.43
CCDC171-202ENST00000432954 SHOX2O60902 331 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 TCF7P36402 384 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 AMPHP49418 695 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 CCT8P50990 548 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 BICDL1Q6ZP65 573 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 PPP1R14BQ96C90 147 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 SPAG5Q96R06 1193 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ZNHIT6Q9NWK9 470 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 A6NHS1 94 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 FOSBP53539 338 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ARPC4P59998 168 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 CNGA3Q16281 694 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 THOC7Q6I9Y2 204 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 NANOGNBQ7Z5D8 188 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 C6orf203Q9P0P8 240 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
CCDC171-202ENST00000432954 TTLL3Q9Y4R7 772 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
CCDC171-202ENST00000432954 ZNF644Q9H582 1327 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 KDM1AO60341 852 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 BCRP11274 1271 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 IL4RP24394 825 aa12.35□□□□□ -0.43
CCDC171-202ENST00000432954 NCCRP1Q6ZVX7 275 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 YTHDF3Q7Z739 585 aaKnown RBP12.35□□□□□ -0.43
CCDC171-202ENST00000432954 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms