RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 GNPATO15228 680 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 PRDM1O75626 825 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 NAT10Q9H0A0 1025 aaKnown RBP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
CLDN4-202ENST00000431918 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLDN4-202ENST00000431918 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
CLDN4-202ENST00000431918 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 LLPHQ9BRT6 129 aaKnown RBP13.25□□□□□ -0.29
CLDN4-202ENST00000431918 RAD21O60216 631 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
CLDN4-202ENST00000431918 WTAPQ15007 396 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
CLDN4-202ENST00000431918 CAMTA1Q9Y6Y1 1673 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
CLDN4-202ENST00000431918 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
CLDN4-202ENST00000431918 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
CLDN4-202ENST00000431918 TFCP2L1Q9NZI6 479 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 PRKAB2O43741 272 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
CLDN4-202ENST00000431918 PDILTQ8N807 584 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
CLDN4-202ENST00000431918 CDCA7Q9BWT1 371 aaPredicted RBP13.24□□□□□ -0.29
CLDN4-202ENST00000431918 UQCRHLA0A096LP55 91 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 SPTLC2O15270 562 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 UQCRHP07919 91 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 XBP1P17861 261 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 ADD2P35612 726 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
CLDN4-202ENST00000431918 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
CLDN4-202ENST00000431918 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 MRPS27Q92552 414 aaKnown RBP13.23□□□□□ -0.29
CLDN4-202ENST00000431918 CHRNDQ07001 517 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 AIFM3Q96NN9 605 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 RIPOR2Q9Y4F9 1068 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 VGLL3A8MV65 326 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 RFC4P35249 363 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 RASGRF1Q13972 1273 aa13.23□□□□□ -0.29
CLDN4-202ENST00000431918 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-202ENST00000431918 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
CLDN4-202ENST00000431918 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 MAGEB6P1A0A0J9YX57 407 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 RTN1Q16799 776 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
CLDN4-202ENST00000431918 SMAP1Q8IYB5 467 aaPredicted RBP13.22□□□□□ -0.29
CLDN4-202ENST00000431918 ANO10Q9NW15 660 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 SLC3A2P08195 630 aaKnown RBP13.22□□□□□ -0.29
CLDN4-202ENST00000431918 CCDC34Q96HJ3 373 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 RNF41Q9H4P4 317 aaPredicted RBP13.22□□□□□ -0.29
CLDN4-202ENST00000431918 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
CLDN4-202ENST00000431918 STX1AQ16623 288 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.29
CLDN4-202ENST00000431918 IQCA1Q86XH1 822 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 USP5P45974 858 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 RESTQ13127 1097 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 HSP90AA4PQ58FG1 418 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 KRT23Q9C075 422 aa13.21□□□□□ -0.29
CLDN4-202ENST00000431918 PTGS1P23219 599 aa13.21□□□□□ -0.3
CLDN4-202ENST00000431918 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.3
CLDN4-202ENST00000431918 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.3
CLDN4-202ENST00000431918 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.3
CLDN4-202ENST00000431918 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CTAGE5O15320 804 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 KCNB2Q92953 911 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 AK7Q96M32 723 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-202ENST00000431918 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CSF1RP07333 972 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 AOPEPQ8N6M6 819 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
CLDN4-202ENST00000431918 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 WASF1Q92558 559 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-202ENST00000431918 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
CLDN4-202ENST00000431918 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms