RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 ZNF710Q8N1W2 664 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 CLUAP1Q96AJ1 413 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 ABCA3Q99758 1704 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 PRDM5Q9NQX1 630 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 WBP1LQ9NX94 342 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 CNPY2Q9Y2B0 182 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 NEURL1BA8MQ27 555 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 ZKSCAN1P17029 563 aaPredicted RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 TRDNQ13061 729 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 TRAF1Q13077 416 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 DIEXFQ68CQ4 756 aaKnown RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 PHAXQ9H814 394 aaKnown RBP5.53□□□□□ -1.52
UBE4A-202ENST00000431736 RNF186Q9NXI6 227 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 TDO2P48775 406 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 NECAB2Q7Z6G3 386 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 TRPM4Q8TD43 1214 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 MON2Q7Z3U7 1717 aa5.53□□□□□ -1.52
UBE4A-202ENST00000431736 UNCXA6NJT0 531 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 JMYQ8N9B5 988 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 BCL2L12Q9HB09 334 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 MINPP1Q9UNW1 487 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 ADCY9O60503 1353 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 F6X3S4 739 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 FARP2O94887 1054 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 ISCA1Q9BUE6 129 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 MYPNQ86TC9 1320 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 MED23Q9ULK4 1368 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 EYA2O00167 538 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 CYP7A1P22680 504 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 GCLCP48506 637 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 KCTD2Q14681 263 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 RAB3GAP1Q15042 981 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 PRPF38BQ5VTL8 546 aaKnown RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 SAPCD2Q86UD0 394 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 OPTNQ96CV9 577 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 TDRD3Q9H7E2 651 aaKnown RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 ZHX2Q9Y6X8 837 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 ZBED4O75132 1171 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 MAP4K4O95819 1239 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 VIL1P09327 827 aaKnown RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 OLFM4Q6UX06 510 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 NUDT12Q9BQG2 462 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 TRIM75PA6NK02 468 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 WNK4Q96J92 1243 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 ZNF70Q9UC06 446 aaPredicted RBP5.52□□□□□ -1.53
UBE4A-202ENST00000431736 MTMR7Q9Y216 660 aa5.52□□□□□ -1.53
UBE4A-202ENST00000431736 CCDC96Q2M329 555 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 DHX36Q9H2U1 1008 aaKnown RBP5.51□□□□□ -1.53
UBE4A-202ENST00000431736 RAD50Q92878 1312 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 MARCH6O60337 910 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 LPXNO60711 386 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 COPB2P35606 906 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 ARRDC4Q8NCT1 418 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 SLAIN1Q8ND83 568 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 GOPCQ9HD26 462 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 SERPINA10Q9UK55 444 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 FBXO3Q9UK99 471 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 PSMC4P43686 418 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 GYG1P46976 350 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 ALDH1L2Q3SY69 923 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 PRAMEF18Q5VWM3 479 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 DZIP1LQ8IYY4 767 aaKnown RBP5.51□□□□□ -1.53
UBE4A-202ENST00000431736 AP5M1Q9H0R1 490 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 HMX1Q9NP08 348 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-202ENST00000431736 TRIM6-TRIM34B2RNG4 842 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 ASNSP08243 561 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 SLC10A3P09131 477 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 CRY2Q49AN0 593 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 CD99L2Q8TCZ2 262 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 PNMA2Q9UL42 364 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 CRYBG1Q9Y4K1 1723 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 NUP188Q5SRE5 1749 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 HDLBPQ00341 1268 aaKnown RBP5.51□□□□□ -1.53
UBE4A-202ENST00000431736 MIGA2Q7L4E1 593 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 DDX19BQ9UMR2 479 aa5.51□□□□□ -1.53
UBE4A-202ENST00000431736 KIF28PB7ZC32 967 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 RGS2P41220 211 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 PDE4BQ07343 736 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 SART3Q15020 963 aaKnown RBP5.5□□□□□ -1.53
UBE4A-202ENST00000431736 PROSER3Q2NL68 480 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 SPRYD7Q5W111 196 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 EP400NLQ6ZTU2 488 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 AACSQ86V21 672 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 FANCIQ9NVI1 1328 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 NCAPG2Q86XI2 1143 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 TTLL11Q8NHH1 800 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 PODXL2Q9NZ53 605 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 GTPBP6O43824 516 aaPredicted RBP5.5□□□□□ -1.53
UBE4A-202ENST00000431736 GRK4P32298 578 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 AKAP17AQ02040 695 aaKnown RBP5.5□□□□□ -1.53
UBE4A-202ENST00000431736 BMS1Q14692 1282 aaKnown RBP5.5□□□□□ -1.53
UBE4A-202ENST00000431736 C8orf58Q8NAV2 365 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 CCDC43Q96MW1 224 aaKnown RBP5.5□□□□□ -1.53
UBE4A-202ENST00000431736 CHD4Q14839 1912 aa5.5□□□□□ -1.53
UBE4A-202ENST00000431736 CXCL11O14625 94 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 POTEIP0CG38 1075 aa5.49□□□□□ -1.53
UBE4A-202ENST00000431736 POTEJP0CG39 1038 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms