RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 DMRTB1Q96MA1 342 aa9.05□□□□□ -0.96
PTPN4-204ENST00000431283 NIF3L1Q9GZT8 377 aa9.05□□□□□ -0.96
PTPN4-204ENST00000431283 DNAJC25Q9H1X3 360 aa9.05□□□□□ -0.96
PTPN4-204ENST00000431283 RAD18Q9NS91 495 aa9.05□□□□□ -0.96
PTPN4-204ENST00000431283 ATG3Q9NT62 314 aa9.05□□□□□ -0.96
PTPN4-204ENST00000431283 BIN2Q9UBW5 565 aaPredicted RBP9.05□□□□□ -0.96
PTPN4-204ENST00000431283 FAM95CA0A1B0GW59 222 aa9.04□□□□□ -0.96
PTPN4-204ENST00000431283 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
PTPN4-204ENST00000431283 MAOBP27338 520 aa9.04□□□□□ -0.96
PTPN4-204ENST00000431283 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
PTPN4-204ENST00000431283 MFSD14AQ96MC6 490 aa9.04□□□□□ -0.96
PTPN4-204ENST00000431283 EIF1AYO14602 144 aaKnown RBP9.03□□□□□ -0.96
PTPN4-204ENST00000431283 TIAF1O95411 115 aa9.03□□□□□ -0.96
PTPN4-204ENST00000431283 DRD2P14416 443 aa9.03□□□□□ -0.96
PTPN4-204ENST00000431283 ZNF423Q2M1K9 1284 aa9.03□□□□□ -0.96
PTPN4-204ENST00000431283 FBXL6Q8N531 539 aa9.03□□□□□ -0.96
PTPN4-204ENST00000431283 TRAK1Q9UPV9 953 aa9.03□□□□□ -0.96
PTPN4-204ENST00000431283 DLGAP3O95886 979 aa9.02□□□□□ -0.97
PTPN4-204ENST00000431283 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
PTPN4-204ENST00000431283 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
PTPN4-204ENST00000431283 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
PTPN4-204ENST00000431283 PPP4R2Q9NY27 417 aa9.02□□□□□ -0.97
PTPN4-204ENST00000431283 B3GALT4O96024 378 aa9.01□□□□□ -0.97
PTPN4-204ENST00000431283 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN4-204ENST00000431283 FBLIM1Q8WUP2 373 aa9.01□□□□□ -0.97
PTPN4-204ENST00000431283 OSBPL1AQ9BXW6 950 aa9.01□□□□□ -0.97
PTPN4-204ENST00000431283 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
PTPN4-204ENST00000431283 LEMD3Q9Y2U8 911 aa9.01□□□□□ -0.97
PTPN4-204ENST00000431283 KIAA1324LA8MWY0 1029 aaPredicted RBP9□□□□□ -0.97
PTPN4-204ENST00000431283 GPR182O15218 404 aa9□□□□□ -0.97
PTPN4-204ENST00000431283 ADH5P11766 374 aa9□□□□□ -0.97
PTPN4-204ENST00000431283 AKAP4Q5JQC9 854 aa9□□□□□ -0.97
PTPN4-204ENST00000431283 RBCK1Q9BYM8 510 aa9□□□□□ -0.97
PTPN4-204ENST00000431283 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
PTPN4-204ENST00000431283 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 ITPKAP23677 461 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 PTPN12Q05209 780 aaKnown RBP8.99□□□□□ -0.97
PTPN4-204ENST00000431283 AP3B2Q13367 1082 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 PDE3AQ14432 1141 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 C2CD4AQ8NCU7 369 aaPredicted RBP8.99□□□□□ -0.97
PTPN4-204ENST00000431283 CSRNP1Q96S65 589 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 NRSN2Q9GZP1 204 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 PIM2Q9P1W9 311 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
PTPN4-204ENST00000431283 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
PTPN4-204ENST00000431283 MED26O95402 600 aa8.98□□□□□ -0.97
PTPN4-204ENST00000431283 RAB6AP20340 208 aa8.98□□□□□ -0.97
PTPN4-204ENST00000431283 MAP7Q14244 749 aa8.98□□□□□ -0.97
PTPN4-204ENST00000431283 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPN4-204ENST00000431283 CDPF1Q6NVV7 123 aa8.98□□□□□ -0.97
PTPN4-204ENST00000431283 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
PTPN4-204ENST00000431283 METTL22Q9BUU2 404 aaPredicted RBP8.98□□□□□ -0.97
PTPN4-204ENST00000431283 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
PTPN4-204ENST00000431283 BRD1O95696 1058 aa8.97□□□□□ -0.97
PTPN4-204ENST00000431283 RPS26P11Q5JNZ5 115 aaPredicted RBP8.97□□□□□ -0.97
PTPN4-204ENST00000431283 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
PTPN4-204ENST00000431283 TBC1D32Q96NH3 1257 aa8.97□□□□□ -0.97
PTPN4-204ENST00000431283 DCTN4Q9UJW0 460 aa8.97□□□□□ -0.97
PTPN4-204ENST00000431283 DTHD1Q6ZMT9 781 aa8.96□□□□□ -0.98
PTPN4-204ENST00000431283 TRIM56Q9BRZ2 755 aaKnown RBP8.96□□□□□ -0.98
PTPN4-204ENST00000431283 ABCB6Q9NP58 842 aa8.96□□□□□ -0.98
PTPN4-204ENST00000431283 ACTL7BQ9Y614 415 aa8.96□□□□□ -0.98
PTPN4-204ENST00000431283 WNT11O96014 354 aa8.95□□□□□ -0.98
PTPN4-204ENST00000431283 SPINK2P20155 84 aa8.95□□□□□ -0.98
PTPN4-204ENST00000431283 IRAK1P51617 712 aa8.95□□□□□ -0.98
PTPN4-204ENST00000431283 GP2P55259 537 aaKnown RBP8.95□□□□□ -0.98
PTPN4-204ENST00000431283 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
PTPN4-204ENST00000431283 EPS8L3Q8TE67 593 aaKnown RBP8.95□□□□□ -0.98
PTPN4-204ENST00000431283 ANGEL1Q9UNK9 670 aaKnown RBP8.95□□□□□ -0.98
PTPN4-204ENST00000431283 GNEQ9Y223 722 aaKnown RBP8.95□□□□□ -0.98
PTPN4-204ENST00000431283 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.94□□□□□ -0.98
PTPN4-204ENST00000431283 F13BP05160 661 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 MAPK1P28482 360 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 ASPAP45381 313 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 GRM2Q14416 872 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 DUSP27Q5VZP5 1158 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 DTX1Q86Y01 620 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
PTPN4-204ENST00000431283 GPN3Q9UHW5 284 aaPredicted RBP8.94□□□□□ -0.98
PTPN4-204ENST00000431283 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
PTPN4-204ENST00000431283 IGHA2P01877 340 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 CTSBP07858 339 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 NFICP08651 508 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 SLFN14P0C7P3 912 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
PTPN4-204ENST00000431283 FCGRTP55899 365 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 CYP27A1Q02318 531 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
PTPN4-204ENST00000431283 AOC2O75106 756 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 ECEL1O95672 775 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 FOSL1P15407 271 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 MCTP1Q6DN14 999 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 ZAR1Q86SH2 424 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 KRTAP4-8Q9BYQ9 185 aa8.92□□□□□ -0.98
PTPN4-204ENST00000431283 CYP26A1O43174 497 aa8.91□□□□□ -0.98
PTPN4-204ENST00000431283 XRCC5P13010 732 aaKnown RBP8.91□□□□□ -0.98
PTPN4-204ENST00000431283 ZC3H12CQ9C0D7 883 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms