RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CYP7A1P22680 504 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 ST5P78524 1137 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 SCRN1Q12765 414 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
USHBP1-203ENST00000431146 GDPD2Q9HCC8 539 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 JAG2Q9Y219 1238 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 RXRBP28702 533 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
USHBP1-203ENST00000431146 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 NCLP19338 710 aaKnown RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 HIBADHP31937 336 aaKnown RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 CCT2P78371 535 aaKnown RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 MB21D2Q8IYB1 491 aaPredicted RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 IFNL3Q8IZI9 196 aa19.71■□□□□ 0.75
USHBP1-203ENST00000431146 GPR101Q96P66 508 aaPredicted RBP19.71■□□□□ 0.75
USHBP1-203ENST00000431146 AGXT2Q9BYV1 514 aa19.71■□□□□ 0.75
USHBP1-203ENST00000431146 INCENPQ9NQS7 918 aa19.71■□□□□ 0.75
USHBP1-203ENST00000431146 PATL2C9JE40 543 aaKnown RBP19.7■□□□□ 0.74
USHBP1-203ENST00000431146 PRC1O43663 620 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 F13A1P00488 732 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 CHAF1AQ13111 956 aaPredicted RBP19.7■□□□□ 0.74
USHBP1-203ENST00000431146 LARP1BQ659C4 914 aaKnown RBP19.7■□□□□ 0.74
USHBP1-203ENST00000431146 NCOA7Q8NI08 942 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 SLC4A4Q9Y6R1 1079 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 CACNA1SQ13698 1873 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 GSG1L2A8MUP6 293 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 PPFIA3O75145 1194 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 ANTXR2P58335 489 aa19.7■□□□□ 0.74
USHBP1-203ENST00000431146 RALYLQ86SE5 291 aaKnown RBP19.7■□□□□ 0.74
USHBP1-203ENST00000431146 NCOA5Q9HCD5 579 aaKnown RBP19.7■□□□□ 0.74
USHBP1-203ENST00000431146 PLSCR1O15162 318 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 MCM5P33992 734 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 COL23A1Q86Y22 540 aaPredicted RBP19.69■□□□□ 0.74
USHBP1-203ENST00000431146 DDX11Q96FC9 970 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 NAPBQ9H115 298 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 CHD4Q14839 1912 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 PFKFB2O60825 505 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 CTDSPL2Q05D32 466 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 KLHL40Q2TBA0 621 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 CRY2Q49AN0 593 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 GPT2Q8TD30 523 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 ZNF384Q8TF68 577 aa19.69■□□□□ 0.74
USHBP1-203ENST00000431146 GOLGB1Q14789 3259 aaKnown RBP19.68■□□□□ 0.74
USHBP1-203ENST00000431146 CDC37L1Q7L3B6 337 aa19.68■□□□□ 0.74
USHBP1-203ENST00000431146 STK11IPQ8N1F8 1099 aa19.68■□□□□ 0.74
USHBP1-203ENST00000431146 AKT1S1Q96B36 256 aa19.68■□□□□ 0.74
USHBP1-203ENST00000431146 NEDD4P46934 1319 aa19.68■□□□□ 0.74
USHBP1-203ENST00000431146 IRS2Q9Y4H2 1338 aa19.68■□□□□ 0.74
USHBP1-203ENST00000431146 PDIA3P30101 505 aaKnown RBP19.67■□□□□ 0.74
USHBP1-203ENST00000431146 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 RAB11FIP4Q86YS3 637 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 SDR42E1Q8WUS8 393 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 NSFL1CQ9UNZ2 370 aaKnown RBP19.67■□□□□ 0.74
USHBP1-203ENST00000431146 CNPY2Q9Y2B0 182 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 B4E1Z4 1266 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 TDO2P48775 406 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 DYNLL1P63167 89 aaKnown RBP19.67■□□□□ 0.74
USHBP1-203ENST00000431146 TRDNQ13061 729 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 CYB5R4Q7L1T6 521 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 TACC3Q9Y6A5 838 aa19.67■□□□□ 0.74
USHBP1-203ENST00000431146 PNPLA7Q6ZV29 1317 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 CTDNEP1O95476 244 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 GPSM2P81274 684 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 ALX1Q15699 326 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 BRPF3Q9ULD4 1205 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 PRDX5P30044 214 aa19.66■□□□□ 0.74
USHBP1-203ENST00000431146 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-203ENST00000431146 CAVIN1Q6NZI2 390 aaKnown RBP19.66■□□□□ 0.74
USHBP1-203ENST00000431146 RBM17Q96I25 401 aaKnown RBP19.66■□□□□ 0.74
USHBP1-203ENST00000431146 XDHP47989 1333 aa19.65■□□□□ 0.74
USHBP1-203ENST00000431146 SEMA3EO15041 775 aa19.65■□□□□ 0.74
USHBP1-203ENST00000431146 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
USHBP1-203ENST00000431146 USP48Q86UV5 1035 aa19.65■□□□□ 0.74
USHBP1-203ENST00000431146 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
USHBP1-203ENST00000431146 RGS17Q9UGC6 210 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-203ENST00000431146 KLF18A0A0U1RQI7 1052 aa19.64■□□□□ 0.74
USHBP1-203ENST00000431146 GNAT2P19087 354 aa19.64■□□□□ 0.74
USHBP1-203ENST00000431146 FOSBP53539 338 aa19.64■□□□□ 0.74
USHBP1-203ENST00000431146 MECOMQ03112 1051 aa19.64■□□□□ 0.74
USHBP1-203ENST00000431146 ZNF274Q96GC6 653 aaPredicted RBP19.64■□□□□ 0.74
USHBP1-203ENST00000431146 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.74
USHBP1-203ENST00000431146 BAZ2AQ9UIF9 1905 aaKnown RBP19.64■□□□□ 0.74
USHBP1-203ENST00000431146 GADD45BO75293 160 aaPredicted RBP19.64■□□□□ 0.73
USHBP1-203ENST00000431146 PDCP20941 246 aa19.64■□□□□ 0.73
USHBP1-203ENST00000431146 DNM1Q05193 864 aaKnown RBP19.64■□□□□ 0.73
USHBP1-203ENST00000431146 NSUN4Q96CB9 384 aaKnown RBP19.64■□□□□ 0.73
USHBP1-203ENST00000431146 RIOK1Q9BRS2 568 aaKnown RBP19.64■□□□□ 0.73
USHBP1-203ENST00000431146 NACAP1Q9BZK3 213 aa19.64■□□□□ 0.73
USHBP1-203ENST00000431146 LEMD3Q9Y2U8 911 aa19.64■□□□□ 0.73
USHBP1-203ENST00000431146 ANKRD31Q8N7Z5 1873 aa19.64■□□□□ 0.73
USHBP1-203ENST00000431146 ZMYM6O95789 1325 aa19.64■□□□□ 0.73
USHBP1-203ENST00000431146 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 FAM173BQ6P4H8 233 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 POTEAQ6S8J7 498 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 FBXL16Q8N461 479 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 UFL1O94874 794 aa19.63■□□□□ 0.73
USHBP1-203ENST00000431146 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms