RNA–Protein interactions for RNA: ENST00000431099.3

CBWD1-208, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-208ENST00000431099 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
CBWD1-208ENST00000431099 COL23A1Q86Y22 540 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-208ENST00000431099 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
CBWD1-208ENST00000431099 POLMQ9NP87 494 aaPredicted RBP8.66□□□□□ -1.02
CBWD1-208ENST00000431099 ATG3Q9NT62 314 aa8.66□□□□□ -1.02
CBWD1-208ENST00000431099 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
CBWD1-208ENST00000431099 MRC1P22897 1456 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-208ENST00000431099 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 BACH1O14867 736 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 DIAPH1O60610 1272 aaKnown RBP8.65□□□□□ -1.02
CBWD1-208ENST00000431099 YY1P25490 414 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 GPC1P35052 558 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
CBWD1-208ENST00000431099 KCNQ4P56696 695 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 CENPCQ03188 943 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 TSEN2Q8NCE0 465 aaKnown RBP8.65□□□□□ -1.02
CBWD1-208ENST00000431099 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
CBWD1-208ENST00000431099 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 SMTNP53814 917 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 EPHA4P54764 986 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 CABP4P57796 275 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 TLR1Q15399 786 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 RETREG2Q8NC44 543 aa8.64□□□□□ -1.03
CBWD1-208ENST00000431099 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 A6NJY4 79 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 TTLL8A6PVC2 850 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 MTFR1Q15390 333 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 GRIP2Q9C0E4 1043 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 GMPR2Q9P2T1 348 aaKnown RBP8.63□□□□□ -1.03
CBWD1-208ENST00000431099 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
CBWD1-208ENST00000431099 CEP350Q5VT06 3117 aa8.63□□□□□ -1.03
CBWD1-208ENST00000431099 COL3A1P02461 1466 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-208ENST00000431099 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 TRAPPC3LQ5T215 181 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-208ENST00000431099 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
CBWD1-208ENST00000431099 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 FOXK2Q01167 660 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 ITPK1Q13572 414 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 GPR162Q16538 588 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 CC2D1BQ5T0F9 858 aaKnown RBP8.61□□□□□ -1.03
CBWD1-208ENST00000431099 GAS2L2Q8NHY3 880 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-208ENST00000431099 SENP2Q9HC62 589 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-208ENST00000431099 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-208ENST00000431099 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 USTQ9Y2C2 406 aa8.61□□□□□ -1.03
CBWD1-208ENST00000431099 BRCA1P38398 1863 aaKnown RBP8.61□□□□□ -1.03
CBWD1-208ENST00000431099 TJP1Q07157 1748 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 ARFGEF1Q9Y6D6 1849 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 LGR5O75473 907 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 TRIM47Q96LD4 638 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 DNMT3LQ9UJW3 386 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 USP3Q9Y6I4 520 aa8.6□□□□□ -1.03
CBWD1-208ENST00000431099 CARNS1A5YM72 827 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 CDK2AP1O14519 115 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
CBWD1-208ENST00000431099 RFC4P35249 363 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 TGFB2P61812 414 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 SLC9A9Q8IVB4 645 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
CBWD1-208ENST00000431099 CLP1Q92989 425 aaKnown RBP8.59□□□□□ -1.03
CBWD1-208ENST00000431099 TEX13AQ9BXU3 409 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-208ENST00000431099 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-208ENST00000431099 GNAT3A8MTJ3 354 aa8.58□□□□□ -1.04
CBWD1-208ENST00000431099 HMOX1P09601 288 aa8.58□□□□□ -1.04
CBWD1-208ENST00000431099 MTHFSDQ2M296 383 aaKnown RBP8.58□□□□□ -1.04
CBWD1-208ENST00000431099 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
CBWD1-208ENST00000431099 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
CBWD1-208ENST00000431099 CEMIPQ8WUJ3 1361 aa8.58□□□□□ -1.04
CBWD1-208ENST00000431099 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 SPATA31C2B4DYI2 1134 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 HTATSF1O43719 755 aaKnown RBP8.57□□□□□ -1.04
CBWD1-208ENST00000431099 C21orf2O43822 256 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 MAN1A2O60476 641 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
CBWD1-208ENST00000431099 WFS1O76024 890 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 STARD3NLO95772 234 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 MMP10P09238 476 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 SNRPBP14678 240 aaKnown RBP8.57□□□□□ -1.04
CBWD1-208ENST00000431099 CRKLP46109 303 aaKnown RBP8.57□□□□□ -1.04
CBWD1-208ENST00000431099 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
CBWD1-208ENST00000431099 TBCELQ5QJ74 424 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
CBWD1-208ENST00000431099 TMEM214Q6NUQ4 689 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms