RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SF3B3Q15393 1217 aaKnown RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TBC1D10BQ4KMP7 808 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 ANKRD13BQ86YJ7 626 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 ERC1Q8IUD2 1116 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 NEK11Q8NG66 645 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 PLIN2Q99541 437 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 RHOXF2Q9BQY4 288 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 JPH2Q9BR39 696 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TSGA10Q9BZW7 698 aa6.1□□□□□ -1.43
PTPN4-203ENST00000430976 TLDC2A0PJX2 215 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 KIF3BO15066 747 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 PCNAP12004 261 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 CENPAP49450 140 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 ARPC4P59998 168 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 GPSM2P81274 684 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 TAF12Q16514 161 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 C21orf62-AS1Q17RA5 79 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 GKAP1Q5VSY0 366 aaPredicted RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 C3orf20Q8ND61 904 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 STAG1Q8WVM7 1258 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 HVCN1Q96D96 273 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 CCSER2Q9H7U1 834 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 CTNNA3Q9UI47 895 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 NOB1Q9ULX3 412 aaKnown RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 A0A1W2PRQ8 180 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 IFIT2P09913 472 aaKnown RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 SCNN1BP51168 640 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 RCAN1P53805 252 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 PTK7Q13308 1070 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 MUM1Q2TAK8 710 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 Q4G0T1 1027 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 C6orf118Q5T5N4 469 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 DAAM2Q86T65 1068 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 TXNDC2Q86VQ3 553 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 SMARCC2Q8TAQ2 1214 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 PAWRQ96IZ0 340 aaKnown RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 VCPKMTQ9H867 229 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 PAPOLBQ9NRJ5 636 aaKnown RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 DSEQ9UL01 958 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 PAIP2BQ9ULR5 123 aaKnown RBP6.09□□□□□ -1.43
PTPN4-203ENST00000430976 ANGPTL3Q9Y5C1 460 aa6.09□□□□□ -1.43
PTPN4-203ENST00000430976 SKOR1P84550 965 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 CFAP70Q5T0N1 1121 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 GJC2Q5T442 439 aaPredicted RBP6.09□□□□□ -1.44
PTPN4-203ENST00000430976 EFCAB2Q5VUJ9 269 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 EGFLAMQ63HQ2 1017 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 CLIP3Q96DZ5 547 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 SAAL1Q96ER3 474 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 C2orf49Q9BVC5 232 aaPredicted RBP6.09□□□□□ -1.44
PTPN4-203ENST00000430976 GPCPD1Q9NPB8 672 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 POLG2Q9UHN1 485 aa6.09□□□□□ -1.44
PTPN4-203ENST00000430976 BAG4O95429 457 aaKnown RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 SERPINB4P48594 390 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 UBASH3AP57075 661 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 RASSF7Q02833 373 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 TRIM14Q14142 442 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 GRAMD1BQ3KR37 738 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 MMS22LQ6ZRQ5 1243 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 ARHGEF2Q92974 986 aaKnown RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 GLMNQ92990 594 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 MAK16Q9BXY0 300 aaKnown RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 SYNCQ9H7C4 482 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 VRTNQ9H8Y1 702 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 EID1Q9Y6B2 187 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 NDC80O14777 642 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 MYL3P08590 195 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 IKQ13123 557 aaPredicted RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 SPATA21Q7Z572 469 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 LRRC43Q8N309 656 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 SNRNP27Q8WVK2 155 aaKnown RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 FERD3LQ96RJ6 166 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 NAP1L3Q99457 506 aaPredicted RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 FSD1Q9BTV5 496 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 VCX3BQ9H321 246 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 ATP6V0A2Q9Y487 856 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 F8VZ95 297 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 RTCAO00442 366 aaKnown RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 DDHD2O94830 711 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 BPNT1O95861 308 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 CTCFP49711 727 aaPredicted RBP6.08□□□□□ -1.44
PTPN4-203ENST00000430976 BLVRAP53004 296 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 NEDD9Q14511 834 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 C11orf91Q3C1V1 193 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 SIL1Q9H173 461 aa6.08□□□□□ -1.44
PTPN4-203ENST00000430976 ERC2O15083 957 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 TBX3O15119 743 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 DCTN1Q14203 1278 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CKAP2LQ8IYA6 745 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 FNBP4Q8N3X1 1017 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 MIEF2Q96C03 454 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 BCL2L12Q9HB09 334 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 DCAF16Q9NXF7 216 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 LMCD1Q9NZU5 365 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 NINLQ9Y2I6 1382 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 C2CD2Q9Y426 696 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ANKRD33BA6NCL7 494 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 PCP4L1A6NKN8 68 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms