RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 HOXB7P09629 217 aa10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 KCNJ4P48050 445 aa10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 HABP4Q5JVS0 413 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 PPP1R15BQ5SWA1 713 aa10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 MOB2Q70IA6 237 aa10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 LRP10Q7Z4F1 713 aa10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 ANGEL1Q9UNK9 670 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-207ENST00000430841 MYO1BO43795 1136 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 GFRA3O60609 400 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 PDE8AO60658 829 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 TM4SF4P48230 202 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 MMP14P50281 582 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 INHBEP58166 350 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 PRAMEF18Q5VWM3 479 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 ISCA1Q9BUE6 129 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 SCAF8Q9UPN6 1271 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 COL1A1P02452 1464 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-207ENST00000430841 PPP1R3GB7ZBB8 358 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 SASH1O94885 1247 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 TMPOP42166 694 aaKnown RBP10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 NEXNQ0ZGT2 675 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 NBPF9Q3BBW0 867 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 MYD88Q99836 296 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 MED23Q9ULK4 1368 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 SPEF2Q9C093 1822 aa10.09□□□□□ -0.79
ECHDC1-207ENST00000430841 IGHMBP2P38935 993 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 KCNC4Q03721 635 aa10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 CALD1Q05682 793 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 NBPF11Q86T75 865 aa10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 EFCC1Q9HA90 598 aa10.08□□□□□ -0.8
ECHDC1-207ENST00000430841 WNT10BO00744 389 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 PCCAP05165 728 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 IREB2P48200 963 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 TRIM28Q13263 835 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 SLC4A8Q2Y0W8 1093 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 SUPT20HL1Q3ZLR7 823 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 STRIP1Q5VSL9 837 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 DUSP27Q5VZP5 1158 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 OTOP1Q7RTM1 612 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 KIAA0825Q8IV33 1275 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 ZFRQ96KR1 1074 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 CFHR5Q9BXR6 569 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 COA1Q9GZY4 146 aa10.07□□□□□ -0.8
ECHDC1-207ENST00000430841 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 CTSWP56202 376 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 KIF22Q14807 665 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 SLC9C1Q4G0N8 1177 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 TTLL5Q6EMB2 1281 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 CCDC146Q8IYE0 955 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 MPHOSPH8Q99549 860 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
ECHDC1-207ENST00000430841 MYH3P11055 1940 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 CHL1O00533 1208 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 CD99L2Q8TCZ2 262 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 GMLQ99445 158 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 RBBP6Q7Z6E9 1792 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-207ENST00000430841 SP3Q02447 781 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 TNFAIP1Q13829 316 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 LAPTM4AQ15012 233 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 RALBP1Q15311 655 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 DACT2Q5SW24 774 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 WNK4Q96J92 1243 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 STK31Q9BXU1 1019 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 DEFB129Q9H1M3 183 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 BSDC1Q9NW68 430 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 PTPN22Q9Y2R2 807 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
ECHDC1-207ENST00000430841 COL4A1P02462 1669 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 GTF2IP78347 998 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 CCDC30Q5VVM6 783 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 ZNF804AQ7Z570 1209 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 JARID2Q92833 1246 aaPredicted RBP10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 MXD3Q9BW11 206 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 ZNF804BA4D1E1 1349 aa10.03□□□□□ -0.8
ECHDC1-207ENST00000430841 UNCXA6NJT0 531 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms