RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
CALD1-207ENST00000430085 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
CALD1-207ENST00000430085 GNAT2P19087 354 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
CALD1-207ENST00000430085 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
CALD1-207ENST00000430085 MYH13Q9UKX3 1938 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 BRD1O95696 1058 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 BRF1Q92994 677 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 PARP3Q9Y6F1 533 aa16.93■□□□□ 0.3
CALD1-207ENST00000430085 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 POLD1P28340 1107 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 EXOSC10Q01780 885 aaKnown RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 ALX1Q15699 326 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 RALYLQ86SE5 291 aaKnown RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 NCOA7Q8NI08 942 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 NAPBQ9H115 298 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 ZMYM6O95789 1325 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 GJB2P29033 226 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 GPSM2P81274 684 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 TRDNQ13061 729 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 STK3Q13188 491 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 FOXD4L5Q5VV16 416 aaPredicted RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 TXNRD3Q86VQ6 643 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 LCORLQ8N3X6 602 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 FOXD4L4Q8WXT5 416 aaPredicted RBP16.92■□□□□ 0.3
CALD1-207ENST00000430085 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
CALD1-207ENST00000430085 MAGEB6P1A0A0J9YX57 407 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 ZNF804AQ7Z570 1209 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 IRS2Q9Y4H2 1338 aa16.91■□□□□ 0.3
CALD1-207ENST00000430085 UFL1O94874 794 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 MCM5P33992 734 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 ZBTB22O15209 634 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 TRAK2O60296 914 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 TDO2P48775 406 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
CALD1-207ENST00000430085 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 PDE6BP35913 854 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
CALD1-207ENST00000430085 MCTP1Q6DN14 999 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
CALD1-207ENST00000430085 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 GTF3C6Q969F1 213 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
CALD1-207ENST00000430085 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
CALD1-207ENST00000430085 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
CALD1-207ENST00000430085 PRC1O43663 620 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 STX6O43752 255 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 SYT1P21579 422 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 APOBRQ0VD83 1088 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 MB21D2Q8IYB1 491 aaPredicted RBP16.88■□□□□ 0.29
CALD1-207ENST00000430085 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 PRKAB2O43741 272 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 NPR1P16066 1061 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 GSE1Q14687 1217 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
CALD1-207ENST00000430085 TBC1D10CQ8IV04 446 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 WDR66Q8TBY9 1149 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 NSUN4Q96CB9 384 aaKnown RBP16.88■□□□□ 0.29
CALD1-207ENST00000430085 NBPF3Q9H094 633 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
CALD1-207ENST00000430085 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
CALD1-207ENST00000430085 SRGNP10124 158 aa16.87■□□□□ 0.29
CALD1-207ENST00000430085 PDIA4P13667 645 aaKnown RBP16.87■□□□□ 0.29
CALD1-207ENST00000430085 MECOMQ03112 1051 aa16.87■□□□□ 0.29
CALD1-207ENST00000430085 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
CALD1-207ENST00000430085 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
CALD1-207ENST00000430085 JAG2Q9Y219 1238 aa16.87■□□□□ 0.29
CALD1-207ENST00000430085 PFKFB2O60825 505 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
CALD1-207ENST00000430085 PDCP20941 246 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 DZIP1Q86YF9 867 aaKnown RBP16.86■□□□□ 0.29
CALD1-207ENST00000430085 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 GPR101Q96P66 508 aaPredicted RBP16.86■□□□□ 0.29
CALD1-207ENST00000430085 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
CALD1-207ENST00000430085 KIF13BQ9NQT8 1826 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
CALD1-207ENST00000430085 PRDX5P30044 214 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms