RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZNF142P52746 1687 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 ISCA1Q9BUE6 129 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
PTCH1-207ENST00000429896 SASS6Q6UVJ0 657 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 ANKRD20A12PQ8NF67 263 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 IGKV5-2P06315 115 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 IARSP41252 1262 aaKnown RBP15□□□□□ -0.01
PTCH1-207ENST00000429896 TCP10Q12799 353 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 SCNN1DP51172 638 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 NDUFB9Q9Y6M9 179 aa15□□□□□ -0.01
PTCH1-207ENST00000429896 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-207ENST00000429896 GNAQP50148 359 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 FMN2Q9NZ56 1722 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 RAB3GAP1Q15042 981 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 C8orf76Q96K31 380 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 CEP131Q9UPN4 1083 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 PLEKHG2Q9H7P9 1386 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 GPAA1O43292 621 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 TGFBRAP1Q8WUH2 860 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 EAF2Q96CJ1 260 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-207ENST00000429896 PRKG1Q13976 671 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 MAPKAPK5Q8IW41 473 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 PAF1Q8N7H5 531 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 PRC1O43663 620 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 TMOD4Q9NZQ9 345 aa14.99□□□□□ -0.01
PTCH1-207ENST00000429896 ZBTB43O43298 467 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 CALM1P0DP23 149 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 CALM2P0DP24 149 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 CALM3P0DP25 149 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 RAB11FIP4Q86YS3 637 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 CCDC129Q6ZRS4 1044 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 IL27Q8NEV9 243 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 PXDNQ92626 1479 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 CCDC194A0A1B0GVG4 234 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 BRF1Q92994 677 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 SDF4Q9BRK5 362 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
PTCH1-207ENST00000429896 PHKA1P46020 1223 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 SULF1Q8IWU6 871 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 ARHGEF10LQ9HCE6 1279 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
PTCH1-207ENST00000429896 FIBPO43427 364 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 WWC2Q6AWC2 1192 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 CIAPIN1Q6FI81 312 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 SLC26A6Q9BXS9 759 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 ADORA1P30542 326 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 KRT85P78386 507 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 RTN1Q16799 776 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 CREB3L3Q68CJ9 461 aa14.97□□□□□ -0.01
PTCH1-207ENST00000429896 ME1P48163 572 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 ANAPC15P60006 121 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 COA1Q9GZY4 146 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 BTDP43251 543 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 LARP6Q9BRS8 491 aaKnown RBP14.96□□□□□ -0.01
PTCH1-207ENST00000429896 TCP10L2B9ZVM9 353 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 CFAP45Q9UL16 551 aa14.96□□□□□ -0.01
PTCH1-207ENST00000429896 RAD17O75943 681 aa14.96□□□□□ -0.02
PTCH1-207ENST00000429896 PTPN12Q05209 780 aaKnown RBP14.96□□□□□ -0.02
PTCH1-207ENST00000429896 PLS1Q14651 629 aa14.96□□□□□ -0.02
PTCH1-207ENST00000429896 LRRC2Q9BYS8 371 aa14.96□□□□□ -0.02
PTCH1-207ENST00000429896 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
PTCH1-207ENST00000429896 GPS2Q13227 327 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 Q6ZUG5 572 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 HAUS7Q99871 368 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 OLFM4Q6UX06 510 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 SYNE4Q8N205 404 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 RUFY1Q96T51 708 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.95□□□□□ -0.023e-7■■■■■ 56.2
PTCH1-207ENST00000429896 USP17L3A6NCW0 530 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 USP17L4A6NCW7 530 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 USP17L1Q7RTZ2 530 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
PTCH1-207ENST00000429896 USP42Q9H9J4 1324 aaKnown RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 DCAF15Q66K64 600 aa14.94□□□□□ -0.02
PTCH1-207ENST00000429896 ARPP21Q9UBL0 812 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 CHRNA5P30532 468 aa14.94□□□□□ -0.02
PTCH1-207ENST00000429896 TRIM28Q13263 835 aaKnown RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 FAM227BQ96M60 508 aa14.94□□□□□ -0.02
PTCH1-207ENST00000429896 ZNF526Q8TF50 670 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 INTS5Q6P9B9 1019 aaKnown RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-207ENST00000429896 CSADQ9Y600 493 aa14.94□□□□□ -0.02
PTCH1-207ENST00000429896 ADCY9O60503 1353 aa14.93□□□□□ -0.02
PTCH1-207ENST00000429896 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
PTCH1-207ENST00000429896 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
PTCH1-207ENST00000429896 RRP36Q96EU6 259 aaKnown RBP14.93□□□□□ -0.02
PTCH1-207ENST00000429896 SPATA32Q96LK8 384 aa14.93□□□□□ -0.02
PTCH1-207ENST00000429896 A0A0G2JLW4 131 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms