RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 MROH7-TTC4A0A0A0MT08 1334 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 CORO7P57737 925 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 MYL5Q02045 173 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
SEMA4D-209ENST00000429836 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 PNOCQ13519 176 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 CARMIL3Q8ND23 1372 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 ZNF609O15014 1411 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 CUTAO60888 179 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 SRGAP1Q7Z6B7 1085 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-209ENST00000429836 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 TC2NQ8N9U0 490 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 VSNL1P62760 191 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
SEMA4D-209ENST00000429836 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 PDIA3P30101 505 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 PDE4BQ07343 736 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 FAM204AQ9H8W3 233 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 FLT4P35916 1363 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 CASP8Q14790 479 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
SEMA4D-209ENST00000429836 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 SOWAHDA6NJG2 315 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 KIF28PB7ZC32 967 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 CDC27P30260 824 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 PSEN1P49768 467 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 TBX2Q13207 712 aaPredicted RBP12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 MKRN1Q9UHC7 482 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-209ENST00000429836 SBNO1A3KN83 1393 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 USP31Q70CQ4 1352 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 LRRIQ3A6PVS8 624 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 STX10O60499 249 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 SYKP43405 635 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 C8orf76Q96K31 380 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 RAB21Q9UL25 225 aa12.71□□□□□ -0.38
SEMA4D-209ENST00000429836 ERLIN1O75477 346 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 YEATS4O95619 227 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 USP5P45974 858 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 USP6P35125 1406 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 EP400NLQ6ZTU2 488 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 TRMT44Q8IYL2 757 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 TUBE1Q9UJT0 475 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 DBNLQ9UJU6 430 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
SEMA4D-209ENST00000429836 FOXN1O15353 648 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 BMP6P22004 513 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 CMA1P23946 247 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 CDC23Q9UJX2 597 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 HDAC5Q9UQL6 1122 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 MMP14P50281 582 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 TADA2BQ86TJ2 420 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 CPLX3Q8WVH0 158 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEMA4D-209ENST00000429836 PRAMEF22A3QJZ6 481 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms