RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 FAM227BQ96M60 508 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 CCDC8Q9H0W5 538 aaPredicted RBP10.26□□□□□ -0.77
GABPB1-205ENST00000429662 BOLA2Q9H3K6 86 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 GPR108Q9NPR9 543 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
GABPB1-205ENST00000429662 TAF5LO75529 589 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 CPA1P15085 419 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 GTF2F1P35269 517 aaKnown RBP eCLIP10.25□□□□□ -0.77
GABPB1-205ENST00000429662 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
GABPB1-205ENST00000429662 LTBP1Q14766 1721 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 DOK7Q18PE1 504 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 DNTTIP2Q5QJE6 756 aaKnown RBP10.25□□□□□ -0.77
GABPB1-205ENST00000429662 RBM43Q6ZSC3 357 aaKnown RBP10.25□□□□□ -0.77
GABPB1-205ENST00000429662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
GABPB1-205ENST00000429662 TTC5Q8N0Z6 440 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 FMNL2Q96PY5 1086 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 FPGT-TNNI3KV9GXZ4 949 aa10.25□□□□□ -0.77
GABPB1-205ENST00000429662 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
GABPB1-205ENST00000429662 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 CTAGE5O15320 804 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 PHKG2P15735 406 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 RFX5P48382 616 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-205ENST00000429662 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-205ENST00000429662 TOB2Q14106 344 aaPredicted RBP10.24□□□□□ -0.77
GABPB1-205ENST00000429662 LRRFIP1Q32MZ4 808 aaKnown RBP10.24□□□□□ -0.77
GABPB1-205ENST00000429662 MCMDC2Q4G0Z9 681 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 GIMAP6Q6P9H5 292 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 XAGE3Q8WTP9 111 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 PIGBQ92521 554 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 GTF3C6Q969F1 213 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 SPATA32Q96LK8 384 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 MYD88Q99836 296 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 HAUS7Q99871 368 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
GABPB1-205ENST00000429662 LOC102724428A0A0B4J2F2 783 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 GYS1P13807 737 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 SIK1P57059 783 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 RASSF7Q02833 373 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 NAA16Q6N069 864 aaPredicted RBP10.23□□□□□ -0.77
GABPB1-205ENST00000429662 TTC6Q86TZ1 520 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 NECAB1Q8N987 351 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 PLBD2Q8NHP8 589 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
GABPB1-205ENST00000429662 TNMDQ9H2S6 317 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 CLSTN2Q9H4D0 955 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 WBP1LQ9NX94 342 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 MKRN1Q9UHC7 482 aaKnown RBP10.23□□□□□ -0.77
GABPB1-205ENST00000429662 TJP1Q07157 1748 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 SH3TC1Q8TE82 1336 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 PASKQ96RG2 1323 aa10.23□□□□□ -0.77
GABPB1-205ENST00000429662 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 HSPA8P11142 646 aaKnown RBP10.22□□□□□ -0.77
GABPB1-205ENST00000429662 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
GABPB1-205ENST00000429662 TYRO3Q06418 890 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 CDC37L1Q7L3B6 337 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 KBTBD3Q8NAB2 608 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
GABPB1-205ENST00000429662 LEO1Q8WVC0 666 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-205ENST00000429662 ZNF396Q96N95 335 aaPredicted RBP10.22□□□□□ -0.77
GABPB1-205ENST00000429662 DSCC1Q9BVC3 393 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 ATG3Q9NT62 314 aa10.22□□□□□ -0.77
GABPB1-205ENST00000429662 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.77
GABPB1-205ENST00000429662 COL11A2P13942 1736 aaPredicted RBP10.21□□□□□ -0.77
GABPB1-205ENST00000429662 PRAMEF22A3QJZ6 481 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 H3BQV1 296 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 GNPATO15228 680 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 PFKFB2O60825 505 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 VEGFAP15692 232 aaPredicted RBP10.21□□□□□ -0.78
GABPB1-205ENST00000429662 CDC25BP30305 580 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 LBX1P52954 281 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 DDR1Q08345 913 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 DHX32Q7L7V1 743 aaKnown RBP10.21□□□□□ -0.78
GABPB1-205ENST00000429662 LRP10Q7Z4F1 713 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 TDRD7Q8NHU6 1098 aaKnown RBP10.21□□□□□ -0.78
GABPB1-205ENST00000429662 SMARCC2Q8TAQ2 1214 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 KIAA1524Q8TCG1 905 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 SIL1Q9H173 461 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 TLR7Q9NYK1 1049 aaKnown RBP10.21□□□□□ -0.78
GABPB1-205ENST00000429662 PCDH11XQ9BZA7 1347 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 PCDH11YQ9BZA8 1340 aa10.21□□□□□ -0.78
GABPB1-205ENST00000429662 MKI67P46013 3256 aaKnown RBP10.21□□□□□ -0.78
GABPB1-205ENST00000429662 NEMFO60524 1076 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 MYL6BP14649 208 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 IL15P40933 162 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 CTCFP49711 727 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 MLLT1Q03111 559 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 TFCP2Q12800 502 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 RESTQ13127 1097 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 DHX8Q14562 1220 aaKnown RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
GABPB1-205ENST00000429662 Q6ZUG5 572 aa10.2□□□□□ -0.78
GABPB1-205ENST00000429662 ZNF589Q86UQ0 364 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms