RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 FNBP4Q8N3X1 1017 aaPredicted RBP19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 TMX3Q96JJ7 454 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 XDHP47989 1333 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 CHMLP26374 656 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 SSFA2P28290 1259 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
SMARCA4-203ENST00000429416 CLRN2A0PK11 232 aa19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 CCDC93Q567U6 631 aa19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 BRDTQ58F21 947 aaPredicted RBP19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 TTLL6Q8N841 843 aa19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 TTC16Q8NEE8 873 aa19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 MMRN2Q9H8L6 949 aa19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 ZNF397Q8NF99 534 aaPredicted RBP19.58■□□□□ 0.73
SMARCA4-203ENST00000429416 KCNQ2O43526 872 aa19.58■□□□□ 0.72
SMARCA4-203ENST00000429416 ZBED4O75132 1171 aa19.58■□□□□ 0.72
SMARCA4-203ENST00000429416 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
SMARCA4-203ENST00000429416 SEC31BQ9NQW1 1179 aa19.58■□□□□ 0.72
SMARCA4-203ENST00000429416 ISM2Q6H9L7 571 aa19.58■□□□□ 0.72
SMARCA4-203ENST00000429416 CTDSPL2Q05D32 466 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 DCAF15Q66K64 600 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 USP44Q9H0E7 712 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 BBOX1O75936 387 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 TXLNBQ8N3L3 684 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 TXNRD1Q16881 649 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 TBC1D2Q9BYX2 928 aa19.57■□□□□ 0.72
SMARCA4-203ENST00000429416 C21orf2O43822 256 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 MYCLP12524 364 aaPredicted RBP19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 MTIF2P46199 727 aaKnown RBP19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 SYCE3A1L190 88 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 FAM227BQ96M60 508 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 LRRC27Q9C0I9 530 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 ANO10Q9NW15 660 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 PUF60Q9UHX1 559 aaKnown RBP19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 RAD50Q92878 1312 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 CCDC102BQ68D86 513 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 RPS6KA4O75676 772 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 MCM4P33991 863 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 STAT6P42226 847 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 PIM2Q9P1W9 311 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 SPATA31A6Q5VVP1 1343 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 TET3O43151 1660 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 PRKCSHP14314 528 aaPredicted RBP19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 GADL1Q6ZQY3 521 aa19.56■□□□□ 0.72
SMARCA4-203ENST00000429416 BEND3Q5T5X7 828 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 AFMP43652 599 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 USH1GQ495M9 461 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 CDC42BPAQ5VT25 1732 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 SKIDA1Q1XH10 827 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 EDC3Q96F86 508 aaKnown RBP19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 MYO6Q9UM54 1294 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 GINS2Q9Y248 185 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 GOPCQ9HD26 462 aa19.55■□□□□ 0.72
SMARCA4-203ENST00000429416 MARCKSP29966 332 aaPredicted RBP19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 EXOC1Q9NV70 894 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 CLIP2Q9UDT6 1046 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 TRIM75PA6NK02 468 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 BMP15O95972 392 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 MCM7P33993 719 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 KRT2P35908 639 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 ANAPC15P60006 121 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 KIFC2Q96AC6 838 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 KIF22Q14807 665 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 KRT79Q5XKE5 535 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 PYM1Q9BRP8 204 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 RBM28Q9NW13 759 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 TFAP4Q01664 338 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 ZSCAN16Q9H4T2 348 aaPredicted RBP19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 AS3MTQ9HBK9 375 aa19.54■□□□□ 0.72
SMARCA4-203ENST00000429416 PTPRMP28827 1452 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 BTDP43251 543 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 PUS3Q9BZE2 481 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 NOP56O00567 594 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 CCP110O43303 1012 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 KIAA1328Q86T90 577 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 FAM212AQ96EL1 285 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 ABT1Q9ULW3 272 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 PLA2R1Q13018 1463 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 USP17L12C9JPN9 530 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 USP17L21D6R901 530 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 EPB41L2O43491 1005 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 CPA1P15085 419 aa19.53■□□□□ 0.72
SMARCA4-203ENST00000429416 NLRP10Q86W26 655 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 NPR1P16066 1061 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 LETM2Q2VYF4 491 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 SYNMO15061 1565 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 PHACTR2O75167 634 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 ATG3Q9NT62 314 aa19.52■□□□□ 0.72
SMARCA4-203ENST00000429416 CHMP2AO43633 222 aa19.52■□□□□ 0.71
SMARCA4-203ENST00000429416 TMC4Q7Z404 712 aa19.52■□□□□ 0.71
SMARCA4-203ENST00000429416 PDE8BO95263 885 aa19.51■□□□□ 0.71
SMARCA4-203ENST00000429416 VPS36Q86VN1 386 aa19.51■□□□□ 0.71
SMARCA4-203ENST00000429416 UBE4AQ14139 1066 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms