RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
CACTIN-203ENST00000429344 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
CACTIN-203ENST00000429344 MRPS27Q92552 414 aaKnown RBP17.3■□□□□ 0.36
CACTIN-203ENST00000429344 HAUS7Q99871 368 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
CACTIN-203ENST00000429344 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 TPM4P67936 248 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 NLRP10Q86W26 655 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 CACNA1FO60840 1977 aa17.3■□□□□ 0.36
CACTIN-203ENST00000429344 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 C8orf76Q96K31 380 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 SLC3A2P08195 630 aaKnown RBP17.29■□□□□ 0.36
CACTIN-203ENST00000429344 ATG9AQ7Z3C6 839 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 LRRN4CLQ8ND94 238 aa17.29■□□□□ 0.36
CACTIN-203ENST00000429344 DDX41Q9UJV9 622 aaKnown RBP17.29■□□□□ 0.36
CACTIN-203ENST00000429344 LOC102724428A0A0B4J2F2 783 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 CTAGE5O15320 804 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 CYP19A1P11511 503 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-203ENST00000429344 SIK1P57059 783 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.28■□□□□ 0.369e-8■■□□□ 13.6
CACTIN-203ENST00000429344 CCDC87Q9NVE4 849 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 ARHGAP29Q52LW3 1261 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 ZSWIM4Q9H7M6 989 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 GOLGA8BA8MQT2 603 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 ZAP70P43403 619 aa17.28■□□□□ 0.36
CACTIN-203ENST00000429344 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
CACTIN-203ENST00000429344 ORC3Q9UBD5 711 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-203ENST00000429344 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.36
CACTIN-203ENST00000429344 TRDNQ13061 729 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 KCNB2Q92953 911 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 KCNQ2O43526 872 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
CACTIN-203ENST00000429344 CTSWP56202 376 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 CREBRFQ8IUR6 639 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 MRFAP1L1Q96HT8 127 aa17.27■□□□□ 0.36
CACTIN-203ENST00000429344 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.35
CACTIN-203ENST00000429344 SNAP23O00161 211 aa17.27■□□□□ 0.35
CACTIN-203ENST00000429344 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.35
CACTIN-203ENST00000429344 CASP7P55210 303 aa17.27■□□□□ 0.35
CACTIN-203ENST00000429344 EPC1Q9H2F5 836 aa17.27■□□□□ 0.35
CACTIN-203ENST00000429344 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 ATP1A3P13637 1013 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 CCZ1BP86790 482 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 CCZ1P86791 482 aaPredicted RBP17.26■□□□□ 0.35
CACTIN-203ENST00000429344 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 ZFP91Q96JP5 570 aaPredicted RBP17.26■□□□□ 0.35
CACTIN-203ENST00000429344 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 COL15A1P39059 1388 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 E7EWF7 191 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 CTDNEP1O95476 244 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 UBXN4Q92575 508 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
CACTIN-203ENST00000429344 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 NEMFO60524 1076 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 RCOR1Q9UKL0 485 aa17.26■□□□□ 0.35
CACTIN-203ENST00000429344 PDE8AO60658 829 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 SPECC1Q5M775 1068 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
CACTIN-203ENST00000429344 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 PFKFB2O60825 505 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
CACTIN-203ENST00000429344 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
CACTIN-203ENST00000429344 ZNF609O15014 1411 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 USP54Q70EL1 1684 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 CAVIN2O95810 425 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
CACTIN-203ENST00000429344 SPTLC2O15270 562 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
CACTIN-203ENST00000429344 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
CACTIN-203ENST00000429344 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 SLC4A9Q96Q91 983 aa17.24■□□□□ 0.35
CACTIN-203ENST00000429344 GSDMDP57764 484 aa17.23■□□□□ 0.35
CACTIN-203ENST00000429344 RBM43Q6ZSC3 357 aaKnown RBP17.23■□□□□ 0.35
CACTIN-203ENST00000429344 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
CACTIN-203ENST00000429344 PPP1R13BQ96KQ4 1090 aa17.23■□□□□ 0.35
CACTIN-203ENST00000429344 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
CACTIN-203ENST00000429344 TEX35Q5T0J7 233 aa17.23■□□□□ 0.35
CACTIN-203ENST00000429344 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
CACTIN-203ENST00000429344 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
CACTIN-203ENST00000429344 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
CACTIN-203ENST00000429344 SLC5A1P13866 664 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 SEC31AO94979 1220 aaKnown RBP17.22■□□□□ 0.35
CACTIN-203ENST00000429344 ZNF202O95125 648 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 ADD1P35611 737 aaKnown RBP17.22■□□□□ 0.35
CACTIN-203ENST00000429344 UBASH3AP57075 661 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 NFXL1Q6ZNB6 911 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms