RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
HDAC1-202ENST00000428704 SLAIN1Q8ND83 568 aa10.95□□□□□ -0.66
HDAC1-202ENST00000428704 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
HDAC1-202ENST00000428704 GPHNQ9NQX3 736 aaPredicted RBP10.95□□□□□ -0.66
HDAC1-202ENST00000428704 CAP1Q01518 475 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 NBPF9Q3BBW0 867 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC1-202ENST00000428704 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 PRDM6Q9NQX0 595 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
HDAC1-202ENST00000428704 MYH3P11055 1940 aa10.94□□□□□ -0.66
HDAC1-202ENST00000428704 C2orf72A6NCS6 295 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 ATP5J2-PTCD1G3V325 749 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
HDAC1-202ENST00000428704 AAMPQ13685 434 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 TWISTNBQ3B726 338 aaPredicted RBP10.93□□□□□ -0.66
HDAC1-202ENST00000428704 CCDC30Q5VVM6 783 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 SHISA4Q96DD7 197 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 WNK4Q96J92 1243 aa10.93□□□□□ -0.66
HDAC1-202ENST00000428704 TRMT112Q9UI30 125 aaKnown RBP10.93□□□□□ -0.66
HDAC1-202ENST00000428704 SH3TC1Q8TE82 1336 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 Q7L0L9 218 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 G2E3Q7L622 706 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 CELF1Q92879 486 aaKnown RBP10.92□□□□□ -0.66
HDAC1-202ENST00000428704 CRBNQ96SW2 442 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 GMLQ99445 158 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 FZD1Q9UP38 647 aa10.92□□□□□ -0.66
HDAC1-202ENST00000428704 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 PLIN1O60240 522 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 UFL1O94874 794 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 EXOSC9Q06265 439 aaKnown RBP10.91□□□□□ -0.66
HDAC1-202ENST00000428704 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
HDAC1-202ENST00000428704 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 STAP2Q9UGK3 403 aa10.91□□□□□ -0.66
HDAC1-202ENST00000428704 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 WNT10BO00744 389 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 VAMP4O75379 141 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 APOBEC3FQ8IUX4 373 aaKnown RBP10.9□□□□□ -0.66
HDAC1-202ENST00000428704 FAM89AQ96GI7 184 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 MYD88Q99836 296 aa10.9□□□□□ -0.66
HDAC1-202ENST00000428704 LARP6Q9BRS8 491 aaKnown RBP10.9□□□□□ -0.66
HDAC1-202ENST00000428704 METTL22Q9BUU2 404 aaPredicted RBP10.9□□□□□ -0.66
HDAC1-202ENST00000428704 VCANP13611 3396 aa10.9□□□□□ -0.67
HDAC1-202ENST00000428704 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
HDAC1-202ENST00000428704 EVI5O60447 810 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 SASH1O94885 1247 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 RARSP54136 660 aaKnown RBP10.89□□□□□ -0.67
HDAC1-202ENST00000428704 FOXK1P85037 733 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 MFSD10Q14728 455 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 MTFR1Q15390 333 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 MTMR10Q9NXD2 777 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 ANKIB1Q9P2G1 1089 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 GGA1Q9UJY5 639 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
HDAC1-202ENST00000428704 PI4KAP2A4QPH2 592 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 MS4A1P11836 297 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 KIF22Q14807 665 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-202ENST00000428704 MAP3K11Q16584 847 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 RTL5Q5HYW3 569 aaPredicted RBP10.88□□□□□ -0.67
HDAC1-202ENST00000428704 C20orf194Q5TEA3 1177 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 PI4KAP1Q8N8J0 262 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
HDAC1-202ENST00000428704 PTPN18Q99952 460 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 STK31Q9BXU1 1019 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 ZFYVE28Q9HCC9 887 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
HDAC1-202ENST00000428704 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-202ENST00000428704 BCAR3O75815 825 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 DDX58O95786 925 aaKnown RBP10.87□□□□□ -0.67
HDAC1-202ENST00000428704 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-202ENST00000428704 COL9A1P20849 921 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 GJA8P48165 433 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 FLIIQ13045 1269 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 DSG2Q14126 1118 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
HDAC1-202ENST00000428704 UBE2Q1Q7Z7E8 422 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 ZBTB38Q8NAP3 1195 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-202ENST00000428704 CCDC191Q8NCU4 936 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
HDAC1-202ENST00000428704 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 UNCXA6NJT0 531 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 FARP2O94887 1054 aaPredicted RBP10.86□□□□□ -0.67
HDAC1-202ENST00000428704 GJB1P08034 283 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 GJA5P36382 358 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 PRMT2P55345 433 aa10.86□□□□□ -0.67
HDAC1-202ENST00000428704 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms