RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MCM10Q7L590 875 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
PTPN13-203ENST00000427191 ZMYND15Q9H091 742 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 Q9H521 79 aa16.19■□□□□ 0.18
PTPN13-203ENST00000427191 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 PLCD1P51178 756 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 USP48Q86UV5 1035 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 BAG1Q99933 345 aaPredicted RBP16.18■□□□□ 0.18
PTPN13-203ENST00000427191 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 MAIP1Q8WWC4 291 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 NAPGQ99747 312 aaPredicted RBP16.18■□□□□ 0.18
PTPN13-203ENST00000427191 FAM204AQ9H8W3 233 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 AGTPBP1Q9UPW5 1226 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 HSPA1LP34931 641 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 C8orf74Q6P047 294 aa16.18■□□□□ 0.18
PTPN13-203ENST00000427191 NUCKS1Q9H1E3 243 aaKnown RBP16.18■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA6CA6NDK9 693 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 PPFIA3O75145 1194 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA6DP0CG33 693 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 DTHD1Q6ZMT9 781 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 TCHPQ9BT92 498 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA6AQ9NYA3 693 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-203ENST00000427191 NDUFAB1O14561 156 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 ZNF569Q5MCW4 686 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC122Q5T0U0 273 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 PTGS1P23219 599 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 SMTNP53814 917 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 RNF10Q8N5U6 811 aaKnown RBP16.17■□□□□ 0.18
PTPN13-203ENST00000427191 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 DNAJC8O75937 253 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC25Q86WR0 208 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 NGLY1Q96IV0 654 aa16.17■□□□□ 0.18
PTPN13-203ENST00000427191 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 TTC36A6NLP5 189 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
PTPN13-203ENST00000427191 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
PTPN13-203ENST00000427191 THEGQ9P2T0 379 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
PTPN13-203ENST00000427191 CLNS1AP54105 237 aaKnown RBP16.16■□□□□ 0.18
PTPN13-203ENST00000427191 WHAMMP3Q1A5X7 153 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 P3H4Q92791 437 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 CNPY2Q9Y2B0 182 aa16.16■□□□□ 0.18
PTPN13-203ENST00000427191 DKC1O60832 514 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPN13-203ENST00000427191 FCHSD1Q86WN1 690 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 KCNG1Q9UIX4 513 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 EXOC7Q9UPT5 735 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA6BA6NDN3 693 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 GDPD2Q9HCC8 539 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 DACT1Q9NYF0 836 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
PTPN13-203ENST00000427191 MYL5Q02045 173 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 CAPZA3Q96KX2 299 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA8QA0A0J9YX86 632 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA8OA6NCC3 632 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 GOLGA8NF8WBI6 632 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
PTPN13-203ENST00000427191 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
PTPN13-203ENST00000427191 TMEM110-MUSTN1A8MSY1 372 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-203ENST00000427191 PPFIA4O75335 1185 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 IL15P40933 162 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-203ENST00000427191 HAUS3Q68CZ6 603 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 PAK2Q13177 524 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
PTPN13-203ENST00000427191 TAF12Q16514 161 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 PHLDB3Q6NSJ2 640 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 HAUS7Q99871 368 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 NAIPQ13075 1403 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 ALDH1L1O75891 902 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 KIF11P52732 1056 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 BRF1Q92994 677 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
PTPN13-203ENST00000427191 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
PTPN13-203ENST00000427191 ISM2Q6H9L7 571 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 CUL4BQ13620 913 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 RSPH3Q86UC2 560 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms