RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 FAM227BQ96M60 508 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 SGSM2O43147 1006 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 TMOD4Q9NZQ9 345 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 RXRAP19793 462 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 DLGAP5Q15398 846 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 INTS4Q96HW7 963 aaKnown RBP15.86■□□□□ 0.13
RPL28-202ENST00000426763 CETN2P41208 172 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
RPL28-202ENST00000426763 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
RPL28-202ENST00000426763 NAP1L4Q99733 375 aaKnown RBP15.86■□□□□ 0.13
RPL28-202ENST00000426763 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
RPL28-202ENST00000426763 CCDC112Q8NEF3 446 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 BCS1LQ9Y276 419 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 LMTK2Q8IWU2 1503 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 BICD1Q96G01 975 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 CNPY2Q9Y2B0 182 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 GTF2IP78347 998 aa15.85■□□□□ 0.13
RPL28-202ENST00000426763 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
RPL28-202ENST00000426763 KRT79Q5XKE5 535 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 TNS3Q68CZ2 1445 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 CEP152O94986 1710 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 SPTLC2O15270 562 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 YEATS4O95619 227 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 MFSD14BQ5SR56 506 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 ZSCAN12O43309 604 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 MARCKSP29966 332 aaPredicted RBP15.84■□□□□ 0.13
RPL28-202ENST00000426763 KLHL40Q2TBA0 621 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 CLIP2Q9UDT6 1046 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 ANGEL1Q9UNK9 670 aaKnown RBP15.84■□□□□ 0.13
RPL28-202ENST00000426763 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
RPL28-202ENST00000426763 ZNF165P49910 485 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 AFMP43652 599 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 FAM182BQ5T319 152 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 TEKT1Q969V4 418 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 TRIM47Q96LD4 638 aa15.83■□□□□ 0.13
RPL28-202ENST00000426763 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 CAMSAP1Q5T5Y3 1602 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 H7C1D1 291 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 MAPKAPK5Q8IW41 473 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 DIP2CQ9Y2E4 1556 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 PIGBQ92521 554 aa15.83■□□□□ 0.12
RPL28-202ENST00000426763 TTF2Q9UNY4 1162 aaKnown RBP15.83■□□□□ 0.12
RPL28-202ENST00000426763 PRDM1O75626 825 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 CHRNDQ07001 517 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 RRAGBQ5VZM2 374 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 CCDC174Q6PII3 467 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 NEBLO76041 1014 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 DNM1Q05193 864 aaKnown RBP15.82■□□□□ 0.12
RPL28-202ENST00000426763 TDRD12Q587J7 1177 aaKnown RBP15.82■□□□□ 0.12
RPL28-202ENST00000426763 TGFBRAP1Q8WUH2 860 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 DEXIO95424 95 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 ISM2Q6H9L7 571 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
RPL28-202ENST00000426763 USP37Q86T82 979 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 GREM2Q9H772 168 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 SNX14Q9Y5W7 946 aa15.82■□□□□ 0.12
RPL28-202ENST00000426763 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 DSCC1Q9BVC3 393 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 GYG1P46976 350 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 ARPP21Q9UBL0 812 aaPredicted RBP15.81■□□□□ 0.12
RPL28-202ENST00000426763 RNF123Q5XPI4 1314 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 ASIC1P78348 528 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 SERPINB2P05120 415 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 CPA1P15085 419 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 MCM7P33993 719 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 TCP10Q12799 353 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 GLT8D2Q9H1C3 349 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 ZNF408Q9H9D4 720 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 COPRSQ9NQ92 184 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 USP40Q9NVE5 1235 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
RPL28-202ENST00000426763 KIF2AO00139 706 aaPredicted RBP15.81■□□□□ 0.12
RPL28-202ENST00000426763 VTI1AQ96AJ9 217 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
RPL28-202ENST00000426763 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 ENOX2Q16206 610 aaKnown RBP15.8■□□□□ 0.12
RPL28-202ENST00000426763 LRRC24Q50LG9 513 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 DTHD1Q6ZMT9 781 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 UBE4AQ14139 1066 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 PPP2R5BQ15173 497 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 CPLX3Q8WVH0 158 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 CIAO1O76071 339 aa15.8■□□□□ 0.12
RPL28-202ENST00000426763 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
RPL28-202ENST00000426763 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
RPL28-202ENST00000426763 TNNT3P45378 269 aaPredicted RBP15.8■□□□□ 0.12
RPL28-202ENST00000426763 LLPHQ9BRT6 129 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms