RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DTNBO60941 627 aa31.39■■■□□ 2.62
LDB1-202ENST00000425280 DEKP35659 375 aaKnown RBP31.39■■■□□ 2.62
LDB1-202ENST00000425280 GSE1Q14687 1217 aa31.39■■■□□ 2.62
LDB1-202ENST00000425280 ADGRA1Q86SQ6 560 aa31.39■■■□□ 2.62
LDB1-202ENST00000425280 ZBTB22O15209 634 aa31.38■■■□□ 2.61
LDB1-202ENST00000425280 MCTP1Q6DN14 999 aa31.38■■■□□ 2.61
LDB1-202ENST00000425280 MIGA1Q8NAN2 632 aa31.38■■■□□ 2.61
LDB1-202ENST00000425280 ANKRD31Q8N7Z5 1873 aa31.38■■■□□ 2.61
LDB1-202ENST00000425280 SYT1P21579 422 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 CHST3Q7LGC8 479 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 MB21D2Q8IYB1 491 aaPredicted RBP31.37■■■□□ 2.61
LDB1-202ENST00000425280 IFNL3Q8IZI9 196 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 GSG1L2A8MUP6 293 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 GNAT2P19087 354 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 GPSM2P81274 684 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 GTF3C6Q969F1 213 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 CRAMP1Q96RY5 1269 aa31.37■■■□□ 2.61
LDB1-202ENST00000425280 PRKAB2O43741 272 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 BBOX1O75936 387 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 TBC1D10CQ8IV04 446 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 NCOA7Q8NI08 942 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 STX6O43752 255 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 FBXL16Q8N461 479 aa31.36■■■□□ 2.61
LDB1-202ENST00000425280 APOBRQ0VD83 1088 aa31.35■■■□□ 2.61
LDB1-202ENST00000425280 ZNF384Q8TF68 577 aa31.35■■■□□ 2.61
LDB1-202ENST00000425280 SLC4A4Q9Y6R1 1079 aa31.35■■■□□ 2.61
LDB1-202ENST00000425280 CHAMP1Q96JM3 812 aa31.34■■■□□ 2.61
LDB1-202ENST00000425280 NAPBQ9H115 298 aa31.34■■■□□ 2.61
LDB1-202ENST00000425280 CHAF1AQ13111 956 aaPredicted RBP31.34■■■□□ 2.61
LDB1-202ENST00000425280 C15orf52Q6ZUT6 534 aaKnown RBP31.34■■■□□ 2.61
LDB1-202ENST00000425280 RALYLQ86SE5 291 aaKnown RBP31.34■■■□□ 2.61
LDB1-202ENST00000425280 BRIP1Q9BX63 1249 aa31.34■■■□□ 2.61
LDB1-202ENST00000425280 MCM5P33992 734 aa31.33■■■□□ 2.61
LDB1-202ENST00000425280 MAGEB6P1A0A0J9YX57 407 aa31.33■■■□□ 2.61
LDB1-202ENST00000425280 PFKFB2O60825 505 aa31.33■■■□□ 2.61
LDB1-202ENST00000425280 ZSCAN22P10073 491 aaPredicted RBP31.33■■■□□ 2.61
LDB1-202ENST00000425280 NAA16Q6N069 864 aaPredicted RBP31.33■■■□□ 2.61
LDB1-202ENST00000425280 NSFL1CQ9UNZ2 370 aaKnown RBP31.33■■■□□ 2.61
LDB1-202ENST00000425280 PRC1O43663 620 aa31.32■■■□□ 2.6
LDB1-202ENST00000425280 ANTXR2P58335 489 aa31.32■■■□□ 2.6
LDB1-202ENST00000425280 MMP10P09238 476 aa31.31■■■□□ 2.6
LDB1-202ENST00000425280 NSUN4Q96CB9 384 aaKnown RBP31.31■■■□□ 2.6
LDB1-202ENST00000425280 GPR101Q96P66 508 aaPredicted RBP31.31■■■□□ 2.6
LDB1-202ENST00000425280 RIOK1Q9BRS2 568 aaKnown RBP31.31■■■□□ 2.6
LDB1-202ENST00000425280 NACAP1Q9BZK3 213 aa31.31■■■□□ 2.6
LDB1-202ENST00000425280 WDR19Q8NEZ3 1342 aa31.31■■■□□ 2.6
LDB1-202ENST00000425280 ATP2B4P23634 1241 aa31.31■■■□□ 2.6
LDB1-202ENST00000425280 SCRN1Q12765 414 aa31.31■■■□□ 2.6
LDB1-202ENST00000425280 SKOR2Q2VWA4 1001 aaPredicted RBP31.31■■■□□ 2.6
LDB1-202ENST00000425280 UFL1O94874 794 aa31.3■■■□□ 2.6
LDB1-202ENST00000425280 MECOMQ03112 1051 aa31.3■■■□□ 2.6
LDB1-202ENST00000425280 TDRD7Q8NHU6 1098 aaKnown RBP31.3■■■□□ 2.6
LDB1-202ENST00000425280 GPHNQ9NQX3 736 aaPredicted RBP31.3■■■□□ 2.6
LDB1-202ENST00000425280 TRDNQ13061 729 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 ZNF804AQ7Z570 1209 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 LMBRD1Q9NUN5 540 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 GGA1Q9UJY5 639 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 PARP3Q9Y6F1 533 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 LRRC37AA6NMS7 1700 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 EZH2Q15910 746 aaKnown RBP31.29■■■□□ 2.6
LDB1-202ENST00000425280 ZNF274Q96GC6 653 aaPredicted RBP31.29■■■□□ 2.6
LDB1-202ENST00000425280 CAMKK2Q96RR4 588 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 PODXL2Q9NZ53 605 aa31.29■■■□□ 2.6
LDB1-202ENST00000425280 PRDX5P30044 214 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 TDO2P48775 406 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 EVCP57679 992 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 MSL1Q68DK7 614 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 MTMR6Q9Y217 621 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 JAG2Q9Y219 1238 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 MAST2Q6P0Q8 1798 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 TIAM2Q8IVF5 1701 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 NKX2-3Q8TAU0 364 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 FBXO41Q8TF61 875 aa31.28■■■□□ 2.6
LDB1-202ENST00000425280 ANO8Q9HCE9 1232 aaPredicted RBP31.28■■■□□ 2.6
LDB1-202ENST00000425280 PDIA3P30101 505 aaKnown RBP31.27■■■□□ 2.6
LDB1-202ENST00000425280 DYNLL1P63167 89 aaKnown RBP31.27■■■□□ 2.6
LDB1-202ENST00000425280 EN1Q05925 392 aaPredicted RBP31.27■■■□□ 2.6
LDB1-202ENST00000425280 TMC4Q7Z404 712 aa31.27■■■□□ 2.6
LDB1-202ENST00000425280 CHD4Q14839 1912 aa31.27■■■□□ 2.6
LDB1-202ENST00000425280 NEDD4P46934 1319 aa31.27■■■□□ 2.6
LDB1-202ENST00000425280 SRGNP10124 158 aa31.26■■■□□ 2.6
LDB1-202ENST00000425280 CTDSPL2Q05D32 466 aa31.26■■■□□ 2.6
LDB1-202ENST00000425280 LARP1BQ659C4 914 aaKnown RBP31.26■■■□□ 2.6
LDB1-202ENST00000425280 SALL1Q9NSC2 1324 aa31.26■■■□□ 2.59
LDB1-202ENST00000425280 PPEF1O14829 653 aaPredicted RBP31.26■■■□□ 2.59
LDB1-202ENST00000425280 JAK2O60674 1132 aa31.26■■■□□ 2.59
LDB1-202ENST00000425280 F13A1P00488 732 aa31.26■■■□□ 2.59
LDB1-202ENST00000425280 CCDC88AQ3V6T2 1871 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 CYB5R4Q7L1T6 521 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 SDR42E1Q8WUS8 393 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 LLPHQ9BRT6 129 aaKnown RBP31.25■■■□□ 2.59
LDB1-202ENST00000425280 TACC3Q9Y6A5 838 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 LTBP1Q14766 1721 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 NPR1P16066 1061 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 PDCP20941 246 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 SPTY2D1Q68D10 685 aaPredicted RBP31.25■■■□□ 2.59
LDB1-202ENST00000425280 SP8Q8IXZ3 490 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 WDR66Q8TBY9 1149 aa31.25■■■□□ 2.59
LDB1-202ENST00000425280 GZF1Q9H116 711 aaPredicted RBP31.25■■■□□ 2.59
LDB1-202ENST00000425280 INCENPQ9NQS7 918 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms