RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 GTF3C3Q9Y5Q9 886 aa4.46□□□□□ -1.69
PMS1-209ENST00000424059 SYNGAP1Q96PV0 1343 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 FAM95CA0A1B0GW59 222 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 CYP11A1P05108 521 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 FOSL1P15407 271 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 USP11P51784 963 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 PTPN12Q05209 780 aaKnown RBP4.46□□□□□ -1.7
PMS1-209ENST00000424059 SOX4Q06945 474 aaPredicted RBP4.46□□□□□ -1.7
PMS1-209ENST00000424059 PCDH1Q08174 1060 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 KIAA0319Q5VV43 1072 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 HGSNATQ68CP4 663 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 NRSN2Q9GZP1 204 aa4.46□□□□□ -1.7
PMS1-209ENST00000424059 CLEC4MQ9H2X3 399 aaPredicted RBP4.46□□□□□ -1.7
PMS1-209ENST00000424059 A0A096LPE4 126 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 A0A1W2PPZ6 126 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 ARID3CA6NKF2 412 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 ICMTO60725 284 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 HNRNPUQ00839 825 aaKnown RBP eCLIP4.45□□□□□ -1.7
PMS1-209ENST00000424059 GSTM4Q03013 218 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 MTMR3Q13615 1198 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 PHLDB3Q6NSJ2 640 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 CITED4Q96RK1 184 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 A0A1W2PP55 124 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 F13BP05160 661 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 TAL1P17542 331 aaPredicted RBP4.45□□□□□ -1.7
PMS1-209ENST00000424059 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 PDE3BQ13370 1112 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 MAP7Q14244 749 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 C2CD4AQ8NCU7 369 aaPredicted RBP4.45□□□□□ -1.7
PMS1-209ENST00000424059 MFSD14AQ96MC6 490 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 LIN7BQ9HAP6 207 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 BRPF3Q9ULD4 1205 aa4.45□□□□□ -1.7
PMS1-209ENST00000424059 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.44□□□□□ -1.7
PMS1-209ENST00000424059 NDUFB5O43674 189 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 ABL1P00519 1130 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 ADH5P11766 374 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 MSMPQ1L6U9 139 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 RPS26P11Q5JNZ5 115 aaPredicted RBP4.44□□□□□ -1.7
PMS1-209ENST00000424059 TCF12Q99081 682 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 LATS2Q9NRM7 1088 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 CCDC87Q9NVE4 849 aa4.44□□□□□ -1.7
PMS1-209ENST00000424059 ANGEL1Q9UNK9 670 aaKnown RBP4.44□□□□□ -1.7
PMS1-209ENST00000424059 B3GALT4O96024 378 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 AP3B2Q13367 1082 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 ZNF211Q13398 564 aaPredicted RBP4.43□□□□□ -1.7
PMS1-209ENST00000424059 POU4F3Q15319 338 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 NFKBIBQ15653 356 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 ZAR1Q86SH2 424 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 UBE2Q2Q8WVN8 375 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 DNAJC25Q9H1X3 360 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 PRKAG2Q9UGJ0 569 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 ADGRE2Q9UHX3 823 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 ADAMTS4O75173 837 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 DLGAP3O95886 979 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 YBX3P16989 372 aaKnown RBP eCLIP4.43□□□□□ -1.7
PMS1-209ENST00000424059 ITPKAP23677 461 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 PDE4CQ08493 712 aa4.43□□□□□ -1.7
PMS1-209ENST00000424059 PRPF40BQ6NWY9 871 aaKnown RBP4.43□□□□□ -1.7
PMS1-209ENST00000424059 GSX1Q9H4S2 264 aaPredicted RBP4.43□□□□□ -1.7
PMS1-209ENST00000424059 CDPF1Q6NVV7 123 aa4.42□□□□□ -1.7
PMS1-209ENST00000424059 GLYCTKQ8IVS8 523 aa4.42□□□□□ -1.7
PMS1-209ENST00000424059 FAM129BQ96TA1 746 aa4.42□□□□□ -1.7
PMS1-209ENST00000424059 ZNF576Q9H609 170 aa4.42□□□□□ -1.7
PMS1-209ENST00000424059 BSDC1Q9NW68 430 aaPredicted RBP4.42□□□□□ -1.7
PMS1-209ENST00000424059 TRAK1Q9UPV9 953 aa4.42□□□□□ -1.7
PMS1-209ENST00000424059 CPNE3O75131 537 aaKnown RBP4.41□□□□□ -1.7
PMS1-209ENST00000424059 PDIA4P13667 645 aaKnown RBP4.41□□□□□ -1.7
PMS1-209ENST00000424059 MAOBP27338 520 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 HOXA10P31260 410 aaPredicted RBP4.41□□□□□ -1.7
PMS1-209ENST00000424059 ZNF423Q2M1K9 1284 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 DUSP27Q5VZP5 1158 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 AGBL5Q8NDL9 886 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 FBLIM1Q8WUP2 373 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 TBC1D32Q96NH3 1257 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 CORO1BQ9BR76 489 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 RNF114Q9Y508 228 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 METTL12A8MUP2 240 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 H3BRB1 525 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 CYP26A1O43174 497 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 POLR3DP05423 398 aaPredicted RBP4.41□□□□□ -1.7
PMS1-209ENST00000424059 FBXL6Q8N531 539 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 GATA6Q92908 595 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 EHD4Q9H223 541 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 TUT1Q9H6E5 874 aaKnown RBP4.41□□□□□ -1.7
PMS1-209ENST00000424059 ACSS3Q9H6R3 686 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 CCDC39Q9UFE4 941 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 ACTL7BQ9Y614 415 aa4.41□□□□□ -1.7
PMS1-209ENST00000424059 GRIA4P48058 902 aa4.4□□□□□ -1.7
PMS1-209ENST00000424059 SPRED3Q2MJR0 410 aa4.4□□□□□ -1.7
PMS1-209ENST00000424059 RAD18Q9NS91 495 aa4.4□□□□□ -1.7
PMS1-209ENST00000424059 DRD2P14416 443 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 RGS19P49795 217 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 CBLL1Q75N03 491 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 C14orf37Q86TY3 774 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 ABI1Q8IZP0 508 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 STK11IPQ8N1F8 1099 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 TRIM56Q9BRZ2 755 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms