RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1B0GUL6 1792 aa21.3■■□□□ 1
CHCHD3-202ENST00000423635 TLR2O60603 784 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 CSADQ9Y600 493 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 H0YGN5 161 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 GNRH1P01148 92 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 TNNI2P48788 182 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 UBE4AQ14139 1066 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 CCDC57Q2TAC2 916 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 LMBR1LQ6UX01 489 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 WWC1Q8IX03 1113 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 CHMP3Q9Y3E7 222 aa21.29■■□□□ 1
CHCHD3-202ENST00000423635 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 TCP10L2B9ZVM9 353 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 PLIN1O60240 522 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 WDHD1O75717 1129 aaPredicted RBP21.28■■□□□ 1
CHCHD3-202ENST00000423635 HIBADHP31937 336 aaKnown RBP21.28■■□□□ 1
CHCHD3-202ENST00000423635 CRKP46108 304 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 PRMT2P55345 433 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 BEND3Q5T5X7 828 aa21.28■■□□□ 1
CHCHD3-202ENST00000423635 ZNF594Q96JF6 807 aaPredicted RBP21.28■■□□□ 1
CHCHD3-202ENST00000423635 FAM84BQ96KN1 310 aaPredicted RBP21.28■■□□□ 1
CHCHD3-202ENST00000423635 SZT2Q5T011 3432 aa21.27■■□□□ 1
CHCHD3-202ENST00000423635 IL16Q14005 1332 aa21.27■■□□□ 1
CHCHD3-202ENST00000423635 CETPP11597 493 aa21.27■□□□□ 0.99
CHCHD3-202ENST00000423635 LACTBP83111 547 aaPredicted RBP21.27■□□□□ 0.99
CHCHD3-202ENST00000423635 KIF22Q14807 665 aa21.27■□□□□ 0.99
CHCHD3-202ENST00000423635 SH3TC2Q8TF17 1288 aa21.27■□□□□ 0.99
CHCHD3-202ENST00000423635 CNNM1Q9NRU3 951 aa21.27■□□□□ 0.99
CHCHD3-202ENST00000423635 GYG1P46976 350 aa21.26■□□□□ 0.99
CHCHD3-202ENST00000423635 ARHGAP39Q9C0H5 1083 aa21.26■□□□□ 0.99
CHCHD3-202ENST00000423635 CACNA1FO60840 1977 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 CEP290O15078 2479 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 BTBD19C9JJ37 291 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 VAMP4O75379 141 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 HDLBPQ00341 1268 aaKnown RBP21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 TAF7LQ5H9L4 462 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 ERO1BQ86YB8 467 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 SNCAIPQ9Y6H5 919 aa21.25■□□□□ 0.99
CHCHD3-202ENST00000423635 MYCP01106 439 aaPredicted RBP21.24■□□□□ 0.99
CHCHD3-202ENST00000423635 MRIQ9BWK5 157 aa21.24■□□□□ 0.99
CHCHD3-202ENST00000423635 TRIOBPQ9H2D6 2365 aa21.23■□□□□ 0.99
CHCHD3-202ENST00000423635 IRF6O14896 467 aa21.23■□□□□ 0.99
CHCHD3-202ENST00000423635 SNAPC2Q13487 334 aa21.23■□□□□ 0.99
CHCHD3-202ENST00000423635 F6X3S4 739 aa21.22■□□□□ 0.99
CHCHD3-202ENST00000423635 GRM8O00222 908 aa21.22■□□□□ 0.99
CHCHD3-202ENST00000423635 GRIK5Q16478 980 aa21.22■□□□□ 0.99
CHCHD3-202ENST00000423635 C17orf99Q6UX52 265 aa21.22■□□□□ 0.99
CHCHD3-202ENST00000423635 ARAP2Q8WZ64 1704 aa21.22■□□□□ 0.99
CHCHD3-202ENST00000423635 PPIL2Q13356 520 aa21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 CHRDL2Q6WN34 429 aa21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 FBXO33Q7Z6M2 555 aa21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 FAM83AQ86UY5 434 aa21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 ZKSCAN4Q969J2 545 aaPredicted RBP21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 SHISA4Q96DD7 197 aa21.21■□□□□ 0.99
CHCHD3-202ENST00000423635 FKBP1CQ5VVH2 108 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 NKX2-3Q8TAU0 364 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 TBC1D22AQ8WUA7 517 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 HOOK2Q96ED9 719 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 WRNIP1Q96S55 665 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 RIPOR2Q9Y4F9 1068 aa21.2■□□□□ 0.98
CHCHD3-202ENST00000423635 CTGFP29279 349 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 PPATQ06203 517 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 MTFR1Q15390 333 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 DPF3Q92784 378 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 ZDHHC15Q96MV8 337 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 PUS3Q9BZE2 481 aaKnown RBP21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 RBM27Q9P2N5 1060 aaKnown RBP21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 SRRDQ9UH36 339 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 RANBP2P49792 3224 aaKnown RBP21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
CHCHD3-202ENST00000423635 HOXD10P28358 340 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 CACNB3P54284 484 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 UBE2Q1Q7Z7E8 422 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 TEKT1Q969V4 418 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 MROH5Q6ZUA9 1318 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 ZSWIM8A7E2V4 1837 aa21.18■□□□□ 0.98
CHCHD3-202ENST00000423635 PSMC4P43686 418 aa21.17■□□□□ 0.98
CHCHD3-202ENST00000423635 GJA8P48165 433 aa21.17■□□□□ 0.98
CHCHD3-202ENST00000423635 APOBEC3HQ6NTF7 200 aaKnown RBP21.17■□□□□ 0.98
CHCHD3-202ENST00000423635 ANKRD23Q86SG2 305 aa21.17■□□□□ 0.98
CHCHD3-202ENST00000423635 PRO3102Q9H379 93 aa21.17■□□□□ 0.98
CHCHD3-202ENST00000423635 ALDH1L1O75891 902 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 GJB1P08034 283 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 DCAF15Q66K64 600 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 VPS37DQ86XT2 251 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 KAZALD1Q96I82 304 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 TRIM47Q96LD4 638 aa21.16■□□□□ 0.98
CHCHD3-202ENST00000423635 OSBPP22059 807 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 GRK4P32298 578 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 ZNF341Q9BYN7 854 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 TMOD2Q9NZR1 351 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 CPA4Q9UI42 421 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 IQSEC3Q9UPP2 1182 aaPredicted RBP21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 SUGT1Q9Y2Z0 365 aa21.15■□□□□ 0.98
CHCHD3-202ENST00000423635 EXOSC9Q06265 439 aaKnown RBP21.14■□□□□ 0.97
CHCHD3-202ENST00000423635 CHAF1AQ13111 956 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms