RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 IQSEC3Q9UPP2 1182 aaPredicted RBP22.33■■□□□ 1.17
RBFOX1-204ENST00000422070 SALL1Q9NSC2 1324 aa22.33■■□□□ 1.17
RBFOX1-204ENST00000422070 KIAA1551Q9HCM1 1747 aa22.33■■□□□ 1.17
RBFOX1-204ENST00000422070 SKOR2Q2VWA4 1001 aaPredicted RBP22.33■■□□□ 1.16
RBFOX1-204ENST00000422070 MB21D2Q8IYB1 491 aaPredicted RBP22.33■■□□□ 1.16
RBFOX1-204ENST00000422070 FBXO41Q8TF61 875 aa22.33■■□□□ 1.16
RBFOX1-204ENST00000422070 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.16
RBFOX1-204ENST00000422070 LTBP1Q14766 1721 aa22.32■■□□□ 1.16
RBFOX1-204ENST00000422070 ATP2B4P23634 1241 aa22.32■■□□□ 1.16
RBFOX1-204ENST00000422070 BRF1Q92994 677 aa22.32■■□□□ 1.16
RBFOX1-204ENST00000422070 CHMP4CQ96CF2 233 aa22.32■■□□□ 1.16
RBFOX1-204ENST00000422070 ABCF2Q9UG63 623 aa22.32■■□□□ 1.16
RBFOX1-204ENST00000422070 GSG1L2A8MUP6 293 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 TRAK2O60296 914 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 CYP7A1P22680 504 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 GJB2P29033 226 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 MCM5P33992 734 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 IFNL3Q8IZI9 196 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 NACAP1Q9BZK3 213 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 ARMT1Q9H993 441 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 EPB41L4AQ9HCS5 686 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 RAI14Q9P0K7 980 aa22.31■■□□□ 1.16
RBFOX1-204ENST00000422070 PFKFB2O60825 505 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 APPP05067 770 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 SYT1P21579 422 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 HAND2P61296 217 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 FGD1P98174 961 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 GSE1Q14687 1217 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 RALYLQ86SE5 291 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 LCORLQ8N3X6 602 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 NECAB1Q8N987 351 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 ZNF274Q96GC6 653 aaPredicted RBP22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 LLPHQ9BRT6 129 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 NBPF3Q9H094 633 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 NAPBQ9H115 298 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 STX6O43752 255 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 TXNRD3Q86VQ6 643 aa22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 TDRD7Q8NHU6 1098 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 RIOK1Q9BRS2 568 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-204ENST00000422070 PDCP20941 246 aa22.29■■□□□ 1.16
RBFOX1-204ENST00000422070 TRDNQ13061 729 aa22.29■■□□□ 1.16
RBFOX1-204ENST00000422070 NAA16Q6N069 864 aaPredicted RBP22.29■■□□□ 1.16
RBFOX1-204ENST00000422070 ZNF804AQ7Z570 1209 aa22.29■■□□□ 1.16
RBFOX1-204ENST00000422070 NSUN4Q96CB9 384 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-204ENST00000422070 MAGEB6P1A0A0J9YX57 407 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 GPSM2P81274 684 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 SPTY2D1Q68D10 685 aaPredicted RBP22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 ADGRA1Q86SQ6 560 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 TBC1D10CQ8IV04 446 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 WDR66Q8TBY9 1149 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 SLC4A4Q9Y6R1 1079 aa22.28■■□□□ 1.16
RBFOX1-204ENST00000422070 ZSCAN22P10073 491 aaPredicted RBP22.27■■□□□ 1.16
RBFOX1-204ENST00000422070 CAMKK2Q96RR4 588 aa22.27■■□□□ 1.16
RBFOX1-204ENST00000422070 GGA1Q9UJY5 639 aa22.27■■□□□ 1.16
RBFOX1-204ENST00000422070 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
RBFOX1-204ENST00000422070 CCDC88AQ3V6T2 1871 aa22.27■■□□□ 1.16
RBFOX1-204ENST00000422070 PRC1O43663 620 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 SRGNP10124 158 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 NPR1P16066 1061 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 PDE6BP35913 854 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 GIMAP6Q6P9H5 292 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 SP8Q8IXZ3 490 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 ZNF384Q8TF68 577 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 LRRC2Q9BYS8 371 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 MMP10P09238 476 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 ANTXR2P58335 489 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 MCTP1Q6DN14 999 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 CNNM2Q9H8M5 875 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 ATP6V1DQ9Y5K8 247 aa22.26■■□□□ 1.15
RBFOX1-204ENST00000422070 PPEF1O14829 653 aaPredicted RBP22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 MECOMQ03112 1051 aa22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 SCRN1Q12765 414 aa22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 MIGA1Q8NAN2 632 aa22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 SMARCC2Q8TAQ2 1214 aa22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 NSFL1CQ9UNZ2 370 aaKnown RBP22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 CHD4Q14839 1912 aa22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
RBFOX1-204ENST00000422070 UFL1O94874 794 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 IL1R1P14778 569 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 TDO2P48775 406 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 APOBRQ0VD83 1088 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 SLC15A2Q16348 729 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 STAG1Q8WVM7 1258 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 MTA3Q9BTC8 594 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 MTMR6Q9Y217 621 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 ATP6V0A2Q9Y487 856 aa22.24■■□□□ 1.15
RBFOX1-204ENST00000422070 PRKAB2O43741 272 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 F13A1P00488 732 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 PDIA3P30101 505 aaKnown RBP22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 ALDH1B1P30837 517 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 STK3Q13188 491 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 AKNAD1Q5T1N1 836 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 TMEM87BQ96K49 555 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 LMBRD1Q9NUN5 540 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 HMGN5P82970 282 aaKnown RBP22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 KLHL40Q2TBA0 621 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 KRT23Q9C075 422 aa22.23■■□□□ 1.15
RBFOX1-204ENST00000422070 PRDX5P30044 214 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms