RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SDR42E1Q8WUS8 393 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 SETDB2Q96T68 719 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 CTNNA3Q9UI47 895 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 MINPP1Q9UNW1 487 aa10.37□□□□□ -0.75
SNCA-206ENST00000420646 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 GOLGA8BA8MQT2 603 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 EVX2Q03828 476 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 SLC4A8Q2Y0W8 1093 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 TXNRD3Q86VQ6 643 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 AIFM3Q96NN9 605 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 MCM5P33992 734 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 KRT85P78386 507 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 MAP3K12Q12852 859 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 UBE3CQ15386 1083 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 TMEM87AQ8NBN3 555 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 AGXT2Q9BYV1 514 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 HPS5Q9UPZ3 1129 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 LAMA4Q16363 1823 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 CLEC4GQ6UXB4 293 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 FAM196AQ6ZSG2 479 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 ZNF512BQ96KM6 892 aaPredicted RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
SNCA-206ENST00000420646 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 ISY1Q9ULR0 285 aaKnown RBP10.36□□□□□ -0.75
SNCA-206ENST00000420646 CYP2D7A0A087X1C5 515 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 RESTQ13127 1097 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 CKAP2LQ8IYA6 745 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 IFNL3Q8IZI9 196 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 CCDC82Q8N4S0 544 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 LEO1Q8WVC0 666 aaPredicted RBP10.35□□□□□ -0.75
SNCA-206ENST00000420646 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 AK7Q96M32 723 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 CDC5LQ99459 802 aaKnown RBP10.35□□□□□ -0.75
SNCA-206ENST00000420646 RAI14Q9P0K7 980 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
SNCA-206ENST00000420646 GSG1L2A8MUP6 293 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 POLR3DP05423 398 aaPredicted RBP10.35□□□□□ -0.75
SNCA-206ENST00000420646 ZSCAN25Q6NSZ9 544 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
SNCA-206ENST00000420646 PHKBQ93100 1093 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 NARFQ9UHQ1 456 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 SLC4A4Q9Y6R1 1079 aa10.35□□□□□ -0.75
SNCA-206ENST00000420646 SPEF2Q9C093 1822 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 CYP7A1P22680 504 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 DYNLL1P63167 89 aaKnown RBP10.34□□□□□ -0.75
SNCA-206ENST00000420646 TRIM44Q96DX7 344 aaPredicted RBP10.34□□□□□ -0.75
SNCA-206ENST00000420646 FAM84BQ96KN1 310 aaPredicted RBP10.34□□□□□ -0.75
SNCA-206ENST00000420646 NAPBQ9H115 298 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 TSPY26PQ9H489 355 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 A0A087WWV3 80 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 TRDNQ13061 729 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 CHAF1AQ13111 956 aaPredicted RBP10.34□□□□□ -0.75
SNCA-206ENST00000420646 CCDC183Q5T5S1 534 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 ZNF384Q8TF68 577 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 DACT1Q9NYF0 836 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
SNCA-206ENST00000420646 TDO2P48775 406 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 RPS8P62241 208 aaKnown RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 NLRP3Q96P20 1036 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 NR1I2O75469 434 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 CDC27P30260 824 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 RFC4P35249 363 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 SF3B3Q15393 1217 aaKnown RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 ERCC4Q92889 916 aaPredicted RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 SYAP1Q96A49 352 aaPredicted RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 ZNF274Q96GC6 653 aaPredicted RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 USP28Q96RU2 1077 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 BSDC1Q9NW68 430 aaPredicted RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 GOLGA6L4A6NEF3 574 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 CPLX1O14810 134 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 PRDM1O75626 825 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 COL1A1P02452 1464 aaPredicted RBP10.33□□□□□ -0.76
SNCA-206ENST00000420646 CNTNAP4Q9C0A0 1308 aa10.33□□□□□ -0.76
SNCA-206ENST00000420646 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 NFIXQ14938 502 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 FAM43AQ8N2R8 423 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
SNCA-206ENST00000420646 ORC3Q9UBD5 711 aaPredicted RBP10.32□□□□□ -0.76
SNCA-206ENST00000420646 SALL1Q9NSC2 1324 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 TPTE2Q6XPS3 522 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
SNCA-206ENST00000420646 BICD2Q8TD16 824 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms