RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CCDC85BQ15834 202 aaPredicted RBP4.4□□□□□ -1.71
VPS41-206ENST00000418457 GRIK4Q16099 956 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 IGF2-ASQ6U949 168 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 SV2BQ7L1I2 683 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 NACC1Q96RE7 527 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 BACH2Q9BYV9 841 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 SAMM50Q9Y512 469 aa4.4□□□□□ -1.71
VPS41-206ENST00000418457 E9PSI1 815 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 ENC1O14682 589 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 DDX3YO15523 660 aaKnown RBP4.39□□□□□ -1.71
VPS41-206ENST00000418457 CYP11A1P05108 521 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 CELA3AP09093 270 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 NME2P22392 152 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 POU4F3Q15319 338 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 DUOXA2Q1HG44 320 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 SHISA2Q6UWI4 295 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 SULF2Q8IWU5 870 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 CORO1BQ9BR76 489 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 TRIM56Q9BRZ2 755 aaKnown RBP4.39□□□□□ -1.71
VPS41-206ENST00000418457 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
VPS41-206ENST00000418457 USP26Q9BXU7 913 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 MRPL18Q9H0U6 180 aaKnown RBP4.39□□□□□ -1.71
VPS41-206ENST00000418457 KCNK4Q9NYG8 393 aa4.39□□□□□ -1.71
VPS41-206ENST00000418457 C9orf172C9J069 976 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 SCAMP3O14828 347 aaKnown RBP4.38□□□□□ -1.71
VPS41-206ENST00000418457 ADAM11O75078 769 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 SELPP16109 830 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 MAOBP27338 520 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 KCNMA1Q12791 1236 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 UBASH3BQ8TF42 649 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 LENG1Q96BZ8 264 aaPredicted RBP4.38□□□□□ -1.71
VPS41-206ENST00000418457 EMILIN2Q9BXX0 1053 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 NRSN2Q9GZP1 204 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 USP21Q9UK80 565 aa4.38□□□□□ -1.71
VPS41-206ENST00000418457 LOC100289279A0A1B0GTE1 492 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 PAGE1O75459 146 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 WISP1O95388 367 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 GSTP1P09211 210 aaKnown RBP4.37□□□□□ -1.71
VPS41-206ENST00000418457 RLBP1P12271 317 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 BMP6P22004 513 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 ARNTP27540 789 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 ZNF76P36508 570 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 HNRNPUQ00839 825 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS41-206ENST00000418457 NRG1Q02297 640 aaPredicted RBP4.37□□□□□ -1.71
VPS41-206ENST00000418457 RASSF7Q02833 373 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 MAP3K11Q16584 847 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 HP1BP3Q5SSJ5 553 aaPredicted RBP4.37□□□□□ -1.71
VPS41-206ENST00000418457 LDLRAD1Q5T700 205 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 PCNX4Q63HM2 1172 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 TTBK2Q6IQ55 1244 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 ACAD11Q709F0 780 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.37□□□□□ -1.71
VPS41-206ENST00000418457 KCNB2Q92953 911 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 DCAF5Q96JK2 942 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 RUSC1Q9BVN2 902 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 CBX8Q9HC52 389 aa4.37□□□□□ -1.71
VPS41-206ENST00000418457 METTL5Q9NRN9 209 aaKnown RBP4.37□□□□□ -1.71
VPS41-206ENST00000418457 KRBA1A5PL33 1030 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 F8W735 103 aaPredicted RBP4.36□□□□□ -1.71
VPS41-206ENST00000418457 ECEL1O95672 775 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 LIG3P49916 1009 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 FANCCQ00597 558 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 PWP1Q13610 501 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 PDE3AQ14432 1141 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 LRRC14Q15048 493 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 EXOSC6Q5RKV6 272 aaKnown RBP4.36□□□□□ -1.71
VPS41-206ENST00000418457 KIAA1211Q6ZU35 1233 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 HS2ST1Q7LGA3 356 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 RELL1Q8IUW5 271 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 TMEM130Q8N3G9 435 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 STK35Q8TDR2 534 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 RNF34Q969K3 372 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 RSRP1Q9BUV0 290 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 ZC3H12CQ9C0D7 883 aaKnown RBP4.36□□□□□ -1.71
VPS41-206ENST00000418457 RNF208Q9H0X6 261 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 AKTIPQ9H8T0 292 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 GGT7Q9UJ14 662 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 CYP8B1Q9UNU6 501 aa4.36□□□□□ -1.71
VPS41-206ENST00000418457 GDF11O95390 407 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 CTSBP07858 339 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 LMNB1P20700 586 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 GBP2P32456 591 aaPredicted RBP4.35□□□□□ -1.71
VPS41-206ENST00000418457 GSK3AP49840 483 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 RPS26P62854 115 aaKnown RBP4.35□□□□□ -1.71
VPS41-206ENST00000418457 ZNF252P-AS1Q0IIN9 211 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 ADGRE1Q14246 886 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 MBTPS1Q14703 1052 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 MAP1SQ66K74 1059 aaPredicted RBP4.35□□□□□ -1.71
VPS41-206ENST00000418457 LLGL2Q6P1M3 1020 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 NPM2Q86SE8 214 aaKnown RBP4.35□□□□□ -1.71
VPS41-206ENST00000418457 PDZD3Q86UT5 571 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 AGGF1Q8N302 714 aaeCLIP4.35□□□□□ -1.71
VPS41-206ENST00000418457 TMEM151AQ8N4L1 468 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 KRT82Q9NSB4 513 aa4.35□□□□□ -1.71
VPS41-206ENST00000418457 MEGF11A6BM72 1044 aa4.34□□□□□ -1.71
VPS41-206ENST00000418457 C1QTNF9BB2RNN3 333 aa4.34□□□□□ -1.71
VPS41-206ENST00000418457 F6X3S4 739 aa4.34□□□□□ -1.71
VPS41-206ENST00000418457 TRIM37O94972 964 aa4.34□□□□□ -1.71
VPS41-206ENST00000418457 ALX3O95076 343 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms