RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CSF1RP07333 972 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 ANKRD7Q92527 254 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 MYL10Q9BUA6 226 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 DHX16O60231 1041 aaKnown RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 EVA1CP58658 441 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 CCZ1BP86790 482 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 CCZ1P86791 482 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 PIGBQ92521 554 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 PIH1D3Q9NQM4 214 aaKnown RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 SNAP23O00161 211 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
HDAC9-208ENST00000417496 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 KCNG4Q8TDN1 519 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 A0A1W2PQ27 194 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 A0A1W2PQ64 194 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 A0A1W2PQD8 194 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 SMTNL1A8MU46 457 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
HDAC9-208ENST00000417496 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
HDAC9-208ENST00000417496 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
HDAC9-208ENST00000417496 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.29
HDAC9-208ENST00000417496 NUP188Q5SRE5 1749 aa16.83■□□□□ 0.29
HDAC9-208ENST00000417496 B4E1Z4 1266 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 SMC2O95347 1197 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 PFKFB1P16118 471 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 CDC27P30260 824 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 ANO1Q5XXA6 986 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 MICU3Q86XE3 530 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 V9GYY5 206 aaPredicted RBP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 SLC3A2P08195 630 aaKnown RBP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 TICAM2Q86XR7 235 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 XPO4Q9C0E2 1151 aaKnown RBP16.83■□□□□ 0.28
HDAC9-208ENST00000417496 IFNKQ9P0W0 207 aa16.83■□□□□ 0.28
HDAC9-208ENST00000417496 ADD2P35612 726 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 PHKA1P46020 1223 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 TRDNQ13061 729 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 WWC3Q9ULE0 1092 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 ABCC6O95255 1503 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 ZNF532Q9HCE3 1301 aa16.82■□□□□ 0.28
HDAC9-208ENST00000417496 YEATS4O95619 227 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 CARD10Q9BWT7 1032 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 BRAPQ7Z569 592 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 ANGEL1Q9UNK9 670 aaKnown RBP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 COL5A2P05997 1499 aaPredicted RBP16.81■□□□□ 0.28
HDAC9-208ENST00000417496 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
HDAC9-208ENST00000417496 GIGYF2Q6Y7W6 1299 aaKnown RBP16.8■□□□□ 0.28
HDAC9-208ENST00000417496 VPS37DQ86XT2 251 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 ATP1A3P13637 1013 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 KRT40Q6A162 431 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 TMC6Q7Z403 805 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 TRMT112Q9UI30 125 aaKnown RBP16.8■□□□□ 0.28
HDAC9-208ENST00000417496 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
HDAC9-208ENST00000417496 IRS4O14654 1257 aaPredicted RBP16.79■□□□□ 0.28
HDAC9-208ENST00000417496 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 APOA5Q6Q788 366 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 NYAP1Q6ZVC0 841 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
HDAC9-208ENST00000417496 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 ANKRD18BA2A2Z9 1011 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 CTSWP56202 376 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 GNL2Q13823 731 aaKnown RBP16.79■□□□□ 0.28
HDAC9-208ENST00000417496 NCAPHQ15003 741 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 ARMCX5Q6P1M9 558 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
HDAC9-208ENST00000417496 STARD3NLO95772 234 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms