RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 ANKRD24Q8TF21 1146 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 KCNB2Q92953 911 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 PRR12Q9ULL5 1215 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 AOX1Q06278 1338 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
SP140-204ENST00000417495 GNAI3P08754 354 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 RWDD2BP57060 319 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 STK31Q9BXU1 1019 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 PCDHGA4Q9Y5G9 962 aa10.36□□□□□ -0.75
SP140-204ENST00000417495 RNMTO43148 476 aaKnown RBP10.35□□□□□ -0.75
SP140-204ENST00000417495 C21orf2O43822 256 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 NAT1P18440 290 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 NDUFV2P19404 249 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
SP140-204ENST00000417495 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
SP140-204ENST00000417495 HSP90B2PQ58FF3 399 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 SYT10Q6XYQ8 523 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 OSBPL3Q9H4L5 887 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 HMMRO75330 724 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 RIC3Q7Z5B4 369 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 FMNL3Q8IVF7 1028 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 KIF18AQ8NI77 898 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 JARID2Q92833 1246 aaPredicted RBP10.35□□□□□ -0.75
SP140-204ENST00000417495 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
SP140-204ENST00000417495 VEZTQ9HBM0 779 aa10.35□□□□□ -0.75
SP140-204ENST00000417495 MAGEA9P43362 315 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 PDCD2Q16342 344 aaPredicted RBP10.34□□□□□ -0.75
SP140-204ENST00000417495 NUTM2GQ5VZR2 741 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 SH3GL3Q99963 347 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 LZTS2Q9BRK4 669 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
SP140-204ENST00000417495 RMI1Q9H9A7 625 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 CWC25Q9NXE8 425 aaPredicted RBP10.34□□□□□ -0.75
SP140-204ENST00000417495 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.34□□□□□ -0.75
SP140-204ENST00000417495 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
SP140-204ENST00000417495 C5P01031 1676 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 SMAPO00193 183 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 LGR5O75473 907 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 MFSD4BQ5TF39 518 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 TBC1D32Q96NH3 1257 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 ACBD3Q9H3P7 528 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 PNMA2Q9UL42 364 aa10.34□□□□□ -0.75
SP140-204ENST00000417495 MOXD2PA6NHM9 499 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 RASA3Q14644 834 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
SP140-204ENST00000417495 SIRT2Q8IXJ6 389 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 CCDC26Q8TAB7 109 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 FAXDC2Q96IV6 333 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 SPOCK3Q9BQ16 436 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 CPSF2Q9P2I0 782 aaKnown RBP10.33□□□□□ -0.76
SP140-204ENST00000417495 CEP85Q6P2H3 762 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 SRLQ86TD4 932 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 SPG7Q9UQ90 795 aa10.33□□□□□ -0.76
SP140-204ENST00000417495 FOXO3O43524 673 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
SP140-204ENST00000417495 TTC19Q6DKK2 380 aaPredicted RBP10.32□□□□□ -0.76
SP140-204ENST00000417495 MMS22LQ6ZRQ5 1243 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 CACTIN-AS1Q8N1I8 211 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 SLX1AQ9BQ83 275 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 UTYO14607 1347 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 ECEL1O95672 775 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 TPM1P09493 284 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 DNAJA1P31689 397 aaKnown RBP10.32□□□□□ -0.76
SP140-204ENST00000417495 COL5A2P05997 1499 aaPredicted RBP10.32□□□□□ -0.76
SP140-204ENST00000417495 KDM6AO15550 1401 aaPredicted RBP10.32□□□□□ -0.76
SP140-204ENST00000417495 HSPA2P54652 639 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 C1orf141Q5JVX7 400 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 IL17RAQ96F46 866 aa10.32□□□□□ -0.76
SP140-204ENST00000417495 ZNF831Q5JPB2 1677 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 PEX19P40855 299 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 MTX1Q13505 466 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 MRPL58Q14197 206 aaKnown RBP10.31□□□□□ -0.76
SP140-204ENST00000417495 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
SP140-204ENST00000417495 EFCAB13Q8IY85 973 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 TNS2Q63HR2 1409 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 MEGF6O75095 1541 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 CREB3O43889 395 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 SMC2O95347 1197 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 ZNF445P59923 1031 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 CBLBQ13191 982 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 NAIF1Q69YI7 327 aaPredicted RBP10.31□□□□□ -0.76
SP140-204ENST00000417495 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 NOP9Q86U38 636 aaKnown RBP10.31□□□□□ -0.76
SP140-204ENST00000417495 PACS2Q86VP3 889 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 OGFOD1Q8N543 542 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 MIEF2Q96C03 454 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 AGAP3Q96P47 875 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 KIF2CQ99661 725 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 SPTLC3Q9NUV7 552 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 ABCF2Q9UG63 623 aa10.31□□□□□ -0.76
SP140-204ENST00000417495 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
SP140-204ENST00000417495 GNAI2P04899 355 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms