RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 PATL2C9JE40 543 aaKnown RBP22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 GOLGA6L22H0YM25 854 aa22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 SYT1P21579 422 aa22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 FBXL16Q8N461 479 aa22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 BRF1Q92994 677 aa22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 ARMT1Q9H993 441 aa22.78■■□□□ 1.24
RAB3IP-205ENST00000417413 MCTP1Q6DN14 999 aa22.77■■□□□ 1.24
RAB3IP-205ENST00000417413 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.24
RAB3IP-205ENST00000417413 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
RAB3IP-205ENST00000417413 ABCF2Q9UG63 623 aa22.77■■□□□ 1.24
RAB3IP-205ENST00000417413 LEMD3Q9Y2U8 911 aa22.77■■□□□ 1.24
RAB3IP-205ENST00000417413 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
RAB3IP-205ENST00000417413 GTF3C6Q969F1 213 aa22.76■■□□□ 1.23
RAB3IP-205ENST00000417413 RBM17Q96I25 401 aaKnown RBP22.76■■□□□ 1.23
RAB3IP-205ENST00000417413 EPB41L4AQ9HCS5 686 aaPredicted RBP22.76■■□□□ 1.23
RAB3IP-205ENST00000417413 GSG1L2A8MUP6 293 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 STX6O43752 255 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 DTNBO60941 627 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 APPP05067 770 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 CYP7A1P22680 504 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 STK3Q13188 491 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 SKOR2Q2VWA4 1001 aaPredicted RBP22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 IFNL3Q8IZI9 196 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 LCORLQ8N3X6 602 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 MAST2Q6P0Q8 1798 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 LRRC37AA6NMS7 1700 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 TIAM2Q8IVF5 1701 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 XDHP47989 1333 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 ZSCAN22P10073 491 aaPredicted RBP22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 ADGRA1Q86SQ6 560 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 NCOA7Q8NI08 942 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 SLC16A10Q8TF71 515 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 CHAMP1Q96JM3 812 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 LMBRD1Q9NUN5 540 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 RAI14Q9P0K7 980 aa22.75■■□□□ 1.23
RAB3IP-205ENST00000417413 PFKFB2O60825 505 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 MMP10P09238 476 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 GNAT2P19087 354 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 FGD1P98174 961 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 C15orf52Q6ZUT6 534 aaKnown RBP22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 CHST3Q7LGC8 479 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 TBC1D10CQ8IV04 446 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 ZNF384Q8TF68 577 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 CRAMP1Q96RY5 1269 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 ANKIB1Q9P2G1 1089 aa22.74■■□□□ 1.23
RAB3IP-205ENST00000417413 WDR19Q8NEZ3 1342 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 EVCP57679 992 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 ANTXR2P58335 489 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 APOBRQ0VD83 1088 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 KIAA1551Q9HCM1 1747 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 TCHHQ07283 1943 aa22.73■■□□□ 1.23
RAB3IP-205ENST00000417413 PRKAB2O43741 272 aa22.72■■□□□ 1.23
RAB3IP-205ENST00000417413 MCM5P33992 734 aa22.72■■□□□ 1.23
RAB3IP-205ENST00000417413 GPSM2P81274 684 aa22.72■■□□□ 1.23
RAB3IP-205ENST00000417413 MIGA1Q8NAN2 632 aa22.72■■□□□ 1.23
RAB3IP-205ENST00000417413 LTBP1Q14766 1721 aa22.72■■□□□ 1.23
RAB3IP-205ENST00000417413 BBOX1O75936 387 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 SCRN1Q12765 414 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 ZNF274Q96GC6 653 aaPredicted RBP22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 MTMR6Q9Y217 621 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 SLC4A4Q9Y6R1 1079 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 MAGEB6P1A0A0J9YX57 407 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 PRC1O43663 620 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 RIOK1Q9BRS2 568 aaKnown RBP22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 NAPBQ9H115 298 aa22.71■■□□□ 1.23
RAB3IP-205ENST00000417413 F13A1P00488 732 aa22.7■■□□□ 1.22
RAB3IP-205ENST00000417413 RALYLQ86SE5 291 aaKnown RBP22.7■■□□□ 1.22
RAB3IP-205ENST00000417413 NKX2-3Q8TAU0 364 aa22.7■■□□□ 1.22
RAB3IP-205ENST00000417413 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
RAB3IP-205ENST00000417413 GPHNQ9NQX3 736 aaPredicted RBP22.7■■□□□ 1.22
RAB3IP-205ENST00000417413 PDIA4P13667 645 aaKnown RBP22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 PDIA3P30101 505 aaKnown RBP22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 PDE6BP35913 854 aa22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 TDRD7Q8NHU6 1098 aaKnown RBP22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 NSUN4Q96CB9 384 aaKnown RBP22.69■■□□□ 1.22
RAB3IP-205ENST00000417413 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 LARP1BQ659C4 914 aaKnown RBP22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 MSL1Q68DK7 614 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 SMARCC2Q8TAQ2 1214 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 LLPHQ9BRT6 129 aaKnown RBP22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 NACAP1Q9BZK3 213 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 TACC3Q9Y6A5 838 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 JAK2O60674 1132 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 PRPF40AO75400 957 aaKnown RBP22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 PDCP20941 246 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 MECOMQ03112 1051 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 TRDNQ13061 729 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 CHAF1AQ13111 956 aaPredicted RBP22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 CYB5R4Q7L1T6 521 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 PODXL2Q9NZ53 605 aa22.68■■□□□ 1.22
RAB3IP-205ENST00000417413 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
RAB3IP-205ENST00000417413 KLHL40Q2TBA0 621 aa22.67■■□□□ 1.22
RAB3IP-205ENST00000417413 GZF1Q9H116 711 aaPredicted RBP22.67■■□□□ 1.22
RAB3IP-205ENST00000417413 NSFL1CQ9UNZ2 370 aaKnown RBP22.67■■□□□ 1.22
RAB3IP-205ENST00000417413 NEDD4P46934 1319 aa22.67■■□□□ 1.22
RAB3IP-205ENST00000417413 QSER1Q2KHR3 1735 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms