RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 HAND2P61296 217 aa20.27■□□□□ 0.84
CALD1-204ENST00000417172 MECOMQ03112 1051 aa20.27■□□□□ 0.84
CALD1-204ENST00000417172 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
CALD1-204ENST00000417172 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.84
CALD1-204ENST00000417172 PRKAB2O43741 272 aa20.27■□□□□ 0.84
CALD1-204ENST00000417172 NSUN4Q96CB9 384 aaKnown RBP20.27■□□□□ 0.84
CALD1-204ENST00000417172 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.84
CALD1-204ENST00000417172 AK2P54819 239 aa20.26■□□□□ 0.83
CALD1-204ENST00000417172 BAZ2AQ9UIF9 1905 aaKnown RBP20.25■□□□□ 0.83
CALD1-204ENST00000417172 APPP05067 770 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 IL1R1P14778 569 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 TSGA10IPQ3SY00 556 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 NAA16Q6N069 864 aaPredicted RBP20.25■□□□□ 0.83
CALD1-204ENST00000417172 RUFY3Q7L099 469 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 TM6SF1Q9BZW5 370 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
CALD1-204ENST00000417172 MYH2Q9UKX2 1941 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 DYNLL1P63167 89 aaKnown RBP20.25■□□□□ 0.83
CALD1-204ENST00000417172 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 CYP46A1Q9Y6A2 500 aa20.25■□□□□ 0.83
CALD1-204ENST00000417172 DPEP1P16444 411 aa20.24■□□□□ 0.83
CALD1-204ENST00000417172 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
CALD1-204ENST00000417172 TMX3Q96JJ7 454 aa20.24■□□□□ 0.83
CALD1-204ENST00000417172 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
CALD1-204ENST00000417172 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
CALD1-204ENST00000417172 KCNA3P22001 575 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 TMX4Q9H1E5 349 aaPredicted RBP20.23■□□□□ 0.83
CALD1-204ENST00000417172 SNED1Q8TER0 1413 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 C21orf2O43822 256 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 BLOC1S2Q6QNY1 142 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 WDR66Q8TBY9 1149 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 RIOK1Q9BRS2 568 aaKnown RBP20.23■□□□□ 0.83
CALD1-204ENST00000417172 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
CALD1-204ENST00000417172 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
CALD1-204ENST00000417172 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 MAGEB6P1A0A0J9YX57 407 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 E7EWF7 191 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 ZBTB22O15209 634 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 RPS6KB1P23443 525 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
CALD1-204ENST00000417172 LDHBP07195 334 aaKnown RBP20.21■□□□□ 0.83
CALD1-204ENST00000417172 PSMA5P28066 241 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 DIXDC1Q155Q3 683 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 DZIP1Q86YF9 867 aaKnown RBP20.21■□□□□ 0.83
CALD1-204ENST00000417172 NEK1Q96PY6 1258 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 PATL2C9JE40 543 aaKnown RBP20.21■□□□□ 0.83
CALD1-204ENST00000417172 LARGE1O95461 756 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 GTF2IP78347 998 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 KRT32Q14532 448 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
CALD1-204ENST00000417172 IFNL3Q8IZI9 196 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 ZGPATQ8N5A5 531 aaKnown RBP20.21■□□□□ 0.83
CALD1-204ENST00000417172 FBXW7Q969H0 707 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.83
CALD1-204ENST00000417172 CTNNA3Q9UI47 895 aa20.21■□□□□ 0.83
CALD1-204ENST00000417172 MXD3Q9BW11 206 aa20.2■□□□□ 0.82
CALD1-204ENST00000417172 COA1Q9GZY4 146 aa20.2■□□□□ 0.82
CALD1-204ENST00000417172 DBNDD1Q9H9R9 158 aa20.2■□□□□ 0.82
CALD1-204ENST00000417172 ADAMTSL1Q8N6G6 1762 aa20.2■□□□□ 0.82
CALD1-204ENST00000417172 BRCA1P38398 1863 aaKnown RBP20.2■□□□□ 0.82
CALD1-204ENST00000417172 MCM2P49736 904 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 MFSD14BQ5SR56 506 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 TBC1D10CQ8IV04 446 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 TTLL6Q8N841 843 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 NKX2-3Q8TAU0 364 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 KCNQ5Q9NR82 932 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
CALD1-204ENST00000417172 ZNF646O15015 1829 aaPredicted RBP20.19■□□□□ 0.82
CALD1-204ENST00000417172 ZNF213O14771 459 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 DDIT3P35638 169 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 SPTY2D1Q68D10 685 aaPredicted RBP20.19■□□□□ 0.82
CALD1-204ENST00000417172 CHST3Q7LGC8 479 aa20.19■□□□□ 0.82
CALD1-204ENST00000417172 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 SMIM22K7EJ46 135 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 DTNBO60941 627 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 POLD1P28340 1107 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 TOB2Q14106 344 aaPredicted RBP20.18■□□□□ 0.82
CALD1-204ENST00000417172 NAPBQ9H115 298 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 INCENPQ9NQS7 918 aa20.18■□□□□ 0.82
CALD1-204ENST00000417172 AOC3Q16853 763 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 KLHL34Q8N239 644 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 TDO2P48775 406 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 CERS5Q8N5B7 392 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 EYA3Q99504 573 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 TACC3Q9Y6A5 838 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
CALD1-204ENST00000417172 GNAT2P19087 354 aa20.16■□□□□ 0.82
CALD1-204ENST00000417172 CTDSPL2Q05D32 466 aa20.16■□□□□ 0.82
CALD1-204ENST00000417172 ALX1Q15699 326 aa20.16■□□□□ 0.82
CALD1-204ENST00000417172 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
CALD1-204ENST00000417172 RTFDC1Q9BY42 306 aaPredicted RBP20.16■□□□□ 0.82
CALD1-204ENST00000417172 TPCN1Q9ULQ1 816 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms