RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 RILPL2Q969X0 211 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 NEUROD6Q96NK8 337 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 IL25Q9H293 177 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 SAGE1Q9NXZ1 904 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 ZNF804BA4D1E1 1349 aa9.79□□□□□ -0.84
AP001042.1-201ENST00000416842 TRIM6-TRIM34B2RNG4 842 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 HIP1O00291 1037 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 HUNKP57058 714 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 CXCL9Q07325 125 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 CCDC158Q5M9N0 1113 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 DLK2Q6UY11 383 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 KBTBD3Q8NAB2 608 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 HELBQ8NG08 1087 aaPredicted RBP9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 TRPM4Q8TD43 1214 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 ANKRD2Q9GZV1 360 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 TAF1P21675 1872 aa9.78□□□□□ -0.84
AP001042.1-201ENST00000416842 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 WTIPA6NIX2 430 aaPredicted RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 SNAP23O00161 211 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 TAF5LO75529 589 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 TRPA1O75762 1119 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 REC8O95072 547 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 MAP4K4O95819 1239 aaPredicted RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 IFIT1P09914 478 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 SLC5A1P13866 664 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 KIF23Q02241 960 aaPredicted RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 SCARF1Q14162 830 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 CASC1Q6TDU7 716 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 CDC37L1Q7L3B6 337 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 CTU1Q7Z7A3 348 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 RPGRQ92834 1020 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 EDC3Q96F86 508 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 RBM17Q96I25 401 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 FAM84BQ96KN1 310 aaPredicted RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 BCL11AQ9H165 835 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 PAG1Q9NWQ8 432 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 RNF186Q9NXI6 227 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.85
AP001042.1-201ENST00000416842 MCAMP43121 646 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 PHKA1P46020 1223 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 RGMBQ6NW40 437 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 PDS5AQ29RF7 1337 aaKnown RBP9.76□□□□□ -0.85
AP001042.1-201ENST00000416842 IGSF3O75054 1194 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 CYP2E1P05181 493 aaPredicted RBP9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 ZAP70P43403 619 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 BCAMP50895 628 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 TTC39AQ5SRH9 613 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 ZMYM1Q5SVZ6 1142 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 SP8Q8IXZ3 490 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 RUFY2Q8WXA3 655 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 VPS33BQ9H267 617 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 ANTXR1Q9H6X2 564 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 HMG20BQ9P0W2 317 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 RAD50Q92878 1312 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
AP001042.1-201ENST00000416842 RNF113AO15541 343 aaKnown RBP9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 RAD17O75943 681 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 ANAPC15P60006 121 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 NMIQ13287 307 aaPredicted RBP9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 GORABQ5T7V8 394 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 MAP4K1Q92918 833 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 SNX21Q969T3 373 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 FAM227BQ96M60 508 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 RTFDC1Q9BY42 306 aaPredicted RBP9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 GBA2Q9HCG7 927 aaPredicted RBP9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 CNOT7Q9UIV1 285 aaKnown RBP9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 ATP6V0A2Q9Y487 856 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
AP001042.1-201ENST00000416842 SPEF2Q9C093 1822 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 TCRBV5S4A2TA0A5A2 114 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 GOLIM4O00461 696 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 SEMA3EO15041 775 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 ZFYP08048 801 aaPredicted RBP9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 SLC10A3P09131 477 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 HSPA4P34932 840 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 ANP32AP39687 249 aaKnown RBP9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 ZNF157P51786 506 aaPredicted RBP9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 RASGRF1Q13972 1273 aa9.73□□□□□ -0.85
AP001042.1-201ENST00000416842 NECTIN1Q15223 517 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms