RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PSD3Q9NYI0 1048 aa16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 CHRM1P11229 460 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 BRMS1Q9HCU9 246 aa16.94■□□□□ 0.3
NCKIPSD-204ENST00000416649 KCNJ6P48051 423 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 RABGGTAQ92696 567 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 DESI2Q9BSY9 194 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 NCOA5Q9HCD5 579 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 TMEM232C9JQI7 657 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 STK38Q15208 465 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 FMR1NBQ8N0W7 255 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 MRFAP1Q9Y605 127 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 A0A0G2JS52 829 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 TXLNAP40222 546 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 EVA1CP58658 441 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 HSP90B2PQ58FF3 399 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 PPM1EQ8WY54 764 aa16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-204ENST00000416649 CYP27B1O15528 508 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 POLR3DP05423 398 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 CCDC151A5D8V7 595 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 OTUD7BQ6GQQ9 843 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 RSRC2Q7L4I2 434 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-204ENST00000416649 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 RHOXF2BP0C7M4 288 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 RHOXF2Q9BQY4 288 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 TTLL5Q6EMB2 1281 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-204ENST00000416649 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 NCAPHQ15003 741 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 HDXQ7Z353 690 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 HIP1O00291 1037 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 PHKG2P15735 406 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 MEGF6O75095 1541 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 MTX1Q13505 466 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 LZTFL1Q9NQ48 299 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 AKAP2Q9Y2D5 859 aa16.9■□□□□ 0.3
NCKIPSD-204ENST00000416649 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 NLRP12P59046 1061 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 NSUN7Q8NE18 718 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 BAG1Q99933 345 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 SLIT3O75094 1523 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 ARHGAP6O43182 974 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 BRD3Q15059 726 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 ABCB6Q9NP58 842 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
NCKIPSD-204ENST00000416649 MAP2K7O14733 419 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 ZNF202O95125 648 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 CORO7P57737 925 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 ZNF790Q6PG37 636 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 LRRC31Q6UY01 552 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 PNKPQ96T60 521 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 CLIC4Q9Y696 253 aa16.88■□□□□ 0.29
NCKIPSD-204ENST00000416649 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 CBFA2T2O43439 604 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 CHST3Q7LGC8 479 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 CABP4P57796 275 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 BEND6Q5SZJ8 279 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 ADALQ6DHV7 355 aa16.87■□□□□ 0.29
NCKIPSD-204ENST00000416649 ERLIN1O75477 346 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 PSEN1P49768 467 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 KRT32Q14532 448 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 RAB11FIP4Q86YS3 637 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 TTC5Q8N0Z6 440 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 FAM204AQ9H8W3 233 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 TAF5LO75529 589 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 MNAT1P51948 309 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms