RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FLT4P35916 1363 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 PNOCQ13519 176 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
SCN1B-202ENST00000415950 RNF113AO15541 343 aaKnown RBP14.63□□□□□ -0.07
SCN1B-202ENST00000415950 COBLO75128 1261 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 MYZAPP0CAP1 466 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 RNASE9P60153 205 aaKnown RBP14.63□□□□□ -0.07
SCN1B-202ENST00000415950 RTN1Q16799 776 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 CEP57Q86XR8 500 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 CEP112Q8N8E3 955 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 UGGT1Q9NYU2 1555 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 CTNNA2P26232 953 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 ADD1P35611 737 aaKnown RBP14.63□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF589Q86UQ0 364 aaPredicted RBP14.63□□□□□ -0.07
SCN1B-202ENST00000415950 CERS3Q8IU89 383 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
SCN1B-202ENST00000415950 A0A1B0GUL7 405 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 HSF2BPO75031 334 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 SLC5A1P13866 664 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 NF2P35240 595 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 SLFNL1Q499Z3 407 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 AKAP4Q5JQC9 854 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 CALML4Q96GE6 196 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 JAG2Q9Y219 1238 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCN1B-202ENST00000415950 MBD5Q9P267 1494 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF518AQ6AHZ1 1483 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 GABPB1Q06547 395 aaPredicted RBP14.62□□□□□ -0.07
SCN1B-202ENST00000415950 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 KCNH3Q9ULD8 1083 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 KCNJ14Q9UNX9 436 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 NEBLO76041 1014 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 IGSF22Q8N9C0 903 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 MAP3K5Q99683 1374 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 NBPF6Q5VWK0 638 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 NBPF4Q96M43 638 aa14.62□□□□□ -0.07
SCN1B-202ENST00000415950 PRAMEF22A3QJZ6 481 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 ZBTB22O15209 634 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 NDUFA8P51970 172 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 FBF1Q8TES7 1133 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 CLIC6Q96NY7 704 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF287Q9HBT7 754 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 KIAA1468Q9P260 1216 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 ANKRD65E5RJM6 399 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 PRDM1O75626 825 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 IL15P40933 162 aaPredicted RBP14.61□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF174Q15697 407 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 DPCR1Q3MIW9 517 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 KANK3Q6NY19 840 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 PAIP2Q9BPZ3 127 aaKnown RBP14.61□□□□□ -0.07
SCN1B-202ENST00000415950 RASSF4Q9H2L5 321 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCN1B-202ENST00000415950 VWA3AA6NCI4 1184 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 KRT28Q7Z3Y7 464 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 PCDHA7Q9UN72 937 aa14.61□□□□□ -0.07
SCN1B-202ENST00000415950 SPECC1LQ69YQ0 1117 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 SLC4A4Q9Y6R1 1079 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 GYS2P54840 703 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 UBXN1Q04323 297 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 KIAA0753Q2KHM9 967 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 FANCLQ9NW38 375 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 RGS12O14924 1447 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 TLDC2A0PJX2 215 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 SMIM23A6NLE4 172 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 CYLC1P35663 651 aaPredicted RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 ETF1P62495 437 aaKnown RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 TM6SF1Q9BZW5 370 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 TAOK3Q9H2K8 898 aa14.6□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
SCN1B-202ENST00000415950 ZMYM3Q14202 1370 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 IFT81Q8WYA0 676 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 OSBPL3Q9H4L5 887 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 AKR1B15C9JRZ8 316 aaPredicted RBP14.59□□□□□ -0.07
SCN1B-202ENST00000415950 MCM7P33993 719 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
SCN1B-202ENST00000415950 AMPD3Q01432 767 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 EPC1Q9H2F5 836 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 RNMTO43148 476 aaKnown RBP14.59□□□□□ -0.07
SCN1B-202ENST00000415950 ZNF853P0CG23 659 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 SCRN1Q12765 414 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 GPHNQ9NQX3 736 aaPredicted RBP14.59□□□□□ -0.07
SCN1B-202ENST00000415950 EXOC1Q9NV70 894 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
SCN1B-202ENST00000415950 E7EWF7 191 aa14.58□□□□□ -0.07
SCN1B-202ENST00000415950 EBAG9O00559 213 aa14.58□□□□□ -0.07
SCN1B-202ENST00000415950 NCBP1Q09161 790 aaKnown RBP14.58□□□□□ -0.07
SCN1B-202ENST00000415950 ZSCAN26Q16670 478 aa14.58□□□□□ -0.07
SCN1B-202ENST00000415950 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.07
SCN1B-202ENST00000415950 A1BGP04217 495 aa14.58□□□□□ -0.08
SCN1B-202ENST00000415950 STAT6P42226 847 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms