RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CCL15-CCL14A0A0B4J2E2 113 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 VAMP4O75379 141 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 GYG1P46976 350 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 VGLL4Q14135 290 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 CCL15Q16663 113 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 CCDC57Q2TAC2 916 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 DZIP1LQ8IYY4 767 aaKnown RBP16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 TDRD7Q8NHU6 1098 aaKnown RBP16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 TMEM39BQ9GZU3 492 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
CTHRC1-202ENST00000415886 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
CTHRC1-202ENST00000415886 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
CTHRC1-202ENST00000415886 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
CTHRC1-202ENST00000415886 TMEM106CQ9BVX2 250 aa16.72■□□□□ 0.27
CTHRC1-202ENST00000415886 ZFYVE28Q9HCC9 887 aa16.72■□□□□ 0.27
CTHRC1-202ENST00000415886 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 ZSWIM8A7E2V4 1837 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 GRM8O00222 908 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 CRKP46108 304 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 FXR1P51114 621 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 GTF2A2P52657 109 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 GRIK5Q16478 980 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 FAM84BQ96KN1 310 aaPredicted RBP16.71■□□□□ 0.27
CTHRC1-202ENST00000415886 MYCP01106 439 aaPredicted RBP16.7■□□□□ 0.26
CTHRC1-202ENST00000415886 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
CTHRC1-202ENST00000415886 PUS3Q9BZE2 481 aaKnown RBP16.7■□□□□ 0.26
CTHRC1-202ENST00000415886 CSADQ9Y600 493 aa16.7■□□□□ 0.26
CTHRC1-202ENST00000415886 CENPFP49454 3210 aa16.7■□□□□ 0.26
CTHRC1-202ENST00000415886 BRCA2P51587 3418 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 TNNI2P48788 182 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 CACNB3P54284 484 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
CTHRC1-202ENST00000415886 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
CTHRC1-202ENST00000415886 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
CTHRC1-202ENST00000415886 SH3TC2Q8TF17 1288 aa16.68■□□□□ 0.26
CTHRC1-202ENST00000415886 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
CTHRC1-202ENST00000415886 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
CTHRC1-202ENST00000415886 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
CTHRC1-202ENST00000415886 E9PSI1 815 aa16.67■□□□□ 0.26
CTHRC1-202ENST00000415886 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
CTHRC1-202ENST00000415886 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
CTHRC1-202ENST00000415886 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
CTHRC1-202ENST00000415886 WRNIP1Q96S55 665 aa16.66■□□□□ 0.26
CTHRC1-202ENST00000415886 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 TLR2O60603 784 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 ECM2O94769 699 aaPredicted RBP16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 CETPP11597 493 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 LACTBP83111 547 aaPredicted RBP16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 KAZALD1Q96I82 304 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
CTHRC1-202ENST00000415886 IRF6O14896 467 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 ALDH1L1O75891 902 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 KIF22Q14807 665 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 ERO1BQ86YB8 467 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 MROH5Q6ZUA9 1318 aa16.64■□□□□ 0.25
CTHRC1-202ENST00000415886 H0YGN5 161 aa16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 WDHD1O75717 1129 aaPredicted RBP16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 SNAPC2Q13487 334 aa16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 LRRC24Q50LG9 513 aa16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
CTHRC1-202ENST00000415886 FRAT2O75474 233 aaPredicted RBP16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 NBPF7P0C2Y1 421 aaPredicted RBP16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 PPIL2Q13356 520 aa16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 TBC1D22AQ8WUA7 517 aa16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 ZDHHC15Q96MV8 337 aa16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 ZCCHC17Q9NP64 241 aaKnown RBP16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
CTHRC1-202ENST00000415886 CTGFP29279 349 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 SLFN5Q08AF3 891 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 MTFR1Q15390 333 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 CAVIN4Q5BKX8 364 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 METTL24Q5JXM2 366 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 APOBEC3HQ6NTF7 200 aaKnown RBP16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 FAM83AQ86UY5 434 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 CPA4Q9UI42 421 aa16.61■□□□□ 0.25
CTHRC1-202ENST00000415886 GNRH1P01148 92 aa16.6■□□□□ 0.25
CTHRC1-202ENST00000415886 BCAMP50895 628 aa16.6■□□□□ 0.25
CTHRC1-202ENST00000415886 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
CTHRC1-202ENST00000415886 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
CTHRC1-202ENST00000415886 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms