RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CHGBP05060 677 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 PSMA5P28066 241 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 PTGER2P43116 358 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 KRT32Q14532 448 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 SLFNL1Q499Z3 407 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 IL17RAQ96F46 866 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 PSMD1Q99460 953 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 KIF2CQ99661 725 aa17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 NOL10Q9BSC4 688 aaKnown RBP17.04■□□□□ 0.32
HMGA1P1-201ENST00000415560 MAGEB6P1A0A0J9YX57 407 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 APPP05067 770 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 KCNB2Q92953 911 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 SNX21Q969T3 373 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 NSUN4Q96CB9 384 aaKnown RBP17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 COL1A1P02452 1464 aaPredicted RBP17.03■□□□□ 0.32
HMGA1P1-201ENST00000415560 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 GTF2IP78347 998 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 MECOMQ03112 1051 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 FBXW7Q969H0 707 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
HMGA1P1-201ENST00000415560 SLC27A2O14975 620 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 PPIP5K2O43314 1243 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 BAG3O95817 575 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 TM6SF1Q9BZW5 370 aa17.01■□□□□ 0.31
HMGA1P1-201ENST00000415560 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 MBD4O95243 580 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 PRDX5P30044 214 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 MCM2P49736 904 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 NEK4P51957 841 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 FKBP1AP62942 108 aaKnown RBP17■□□□□ 0.31
HMGA1P1-201ENST00000415560 ALX1Q15699 326 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 PALD1Q9ULE6 856 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 JAG2Q9Y219 1238 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 CHD4Q14839 1912 aa17■□□□□ 0.31
HMGA1P1-201ENST00000415560 ZNF213O14771 459 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 ECE2O60344 883 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 VPS53Q5VIR6 699 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 SLC4A4Q9Y6R1 1079 aa16.99■□□□□ 0.31
HMGA1P1-201ENST00000415560 FGAP02671 866 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 AOC3Q16853 763 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 MIGA1Q8NAN2 632 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 NAPBQ9H115 298 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 CYP46A1Q9Y6A2 500 aa16.98■□□□□ 0.31
HMGA1P1-201ENST00000415560 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 USP17L3A6NCW0 530 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 USP17L4A6NCW7 530 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 PLCG2P16885 1265 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 USP17L1Q7RTZ2 530 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 LCORLQ8N3X6 602 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
HMGA1P1-201ENST00000415560 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 CYP21A2P08686 494 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 GIMAP6Q6P9H5 292 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 BLOC1S2Q6QNY1 142 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
HMGA1P1-201ENST00000415560 TDO2P48775 406 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 PPP4CP60510 307 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 RUFY3Q7L099 469 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
HMGA1P1-201ENST00000415560 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
HMGA1P1-201ENST00000415560 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
HMGA1P1-201ENST00000415560 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
HMGA1P1-201ENST00000415560 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
HMGA1P1-201ENST00000415560 TRDNQ13061 729 aa16.94■□□□□ 0.3
HMGA1P1-201ENST00000415560 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms