RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 PRC1O43663 620 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 APPP05067 770 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 MAGEB6Q8N7X4 407 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 TMEM51Q9NW97 253 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
RUBCN-204ENST00000415452 A0A1B0GUL6 1792 aa13.4□□□□□ -0.26
RUBCN-204ENST00000415452 COL4A1P02462 1669 aa13.4□□□□□ -0.27
RUBCN-204ENST00000415452 LY75O60449 1722 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 H3BQV1 296 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 ALX1Q15699 326 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
RUBCN-204ENST00000415452 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 TAF1LQ8IZX4 1826 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 CCT2P78371 535 aaKnown RBP13.39□□□□□ -0.27
RUBCN-204ENST00000415452 TRDNQ13061 729 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
RUBCN-204ENST00000415452 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
RUBCN-204ENST00000415452 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 CCDC183Q5T5S1 534 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 ELP1O95163 1332 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 TAF1P21675 1872 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 LETM1O95202 739 aaPredicted RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 CLCN1P35523 988 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 SCAND2PQ9GZW5 306 aaPredicted RBP13.38□□□□□ -0.27
RUBCN-204ENST00000415452 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
RUBCN-204ENST00000415452 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
RUBCN-204ENST00000415452 ANTXR2P58335 489 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
RUBCN-204ENST00000415452 TPTE2Q6XPS3 522 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
RUBCN-204ENST00000415452 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 SALL1Q9NSC2 1324 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 MBD4O95243 580 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 RESTQ13127 1097 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 TTC6Q86TZ1 520 aa13.37□□□□□ -0.27
RUBCN-204ENST00000415452 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
RUBCN-204ENST00000415452 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
RUBCN-204ENST00000415452 DHX16O60231 1041 aaKnown RBP13.36□□□□□ -0.27
RUBCN-204ENST00000415452 GNAT2P19087 354 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 IFNL3Q8IZI9 196 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
RUBCN-204ENST00000415452 TSPY26PQ9H489 355 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
RUBCN-204ENST00000415452 LRP2BPQ9P2M1 347 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 CAVIN4Q5BKX8 364 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 RPS8P62241 208 aaKnown RBP13.36□□□□□ -0.27
RUBCN-204ENST00000415452 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 NAPBQ9H115 298 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 ARMT1Q9H993 441 aa13.36□□□□□ -0.27
RUBCN-204ENST00000415452 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
RUBCN-204ENST00000415452 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 GYG1P46976 350 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 SPATA32Q96LK8 384 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
RUBCN-204ENST00000415452 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 NACAP1Q9BZK3 213 aa13.35□□□□□ -0.27
RUBCN-204ENST00000415452 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
RUBCN-204ENST00000415452 TFIP11Q9UBB9 837 aaKnown RBP13.35□□□□□ -0.27
RUBCN-204ENST00000415452 CHD4Q14839 1912 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 RFC4P35249 363 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
RUBCN-204ENST00000415452 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
RUBCN-204ENST00000415452 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 LCORLQ8N3X6 602 aa13.34□□□□□ -0.27
RUBCN-204ENST00000415452 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
RUBCN-204ENST00000415452 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms